DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and sphinx1

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_729255.2 Gene:sphinx1 / 318005 FlyBaseID:FBgn0052383 Length:253 Species:Drosophila melanogaster


Alignment Length:272 Identity:57/272 - (20%)
Similarity:112/272 - (41%) Gaps:51/272 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIWLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICS-----GVIL 66
            ::.||:|..::.|      ..:..|..||.||..|:.....|.|.| ..:|:...|     |.|:
  Fly     4 VVTLLVLSLTVSV------GEKNKLSPRIAGGYRAKTFTIIYLVGI-VYFKSQTSSLNYGAGTII 61

  Fly    67 NEQWILTAGHCALDFSIEDLRIIVGTNDRLEPGQTLFPDEALVHCLYDIPYVYNNDIALIHVNES 131
            :.|||||. ...|.:|..::.:   .:.|...|             :||..:|..:....:.|:.
  Fly    62 SNQWILTV-KTVLKYSYIEVHL---ASRRSYRG-------------FDIIRIYKENFRFHYDNDH 109

  Fly   132 II---------FNDRTQIVEL----SREQPPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHE 183
            :|         |:.|...|.:    :|.:...|:...:.|:|..:......::::.:.:.::.:.
  Fly   110 VIALVKCPYQKFDRRMDRVRVPAYDTRFERYVGNMTMVCGYGTEKRHAKLPEWMRCIEVEVMNNT 174

  Fly   184 ECRERWDFHDGIDIGHICTFTREGEGACSGDSGGPLMWEG---KLVGLVNW--GRACGVGMPDMY 243
            ||.:   ::..:....:||.....:|.|.||.||.::..|   ..:|:: |  ...|.:|.|.::
  Fly   175 ECAK---YYTPLKWYEMCTSGEGFKGVCEGDIGGAVVTMGPNPTFIGII-WLMPENCSIGYPSVH 235

  Fly   244 ANTVYYQDWIRR 255
            .....:..||:|
  Fly   236 IRVSDHIKWIKR 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 51/244 (21%)
sphinx1NP_729255.2 Tryp_SPc 25..245 CDD:473915 49/241 (20%)

Return to query results.
Submit another query.