DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and Prtn3

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_038934901.1 Gene:Prtn3 / 314615 RGDID:1304898 Length:422 Species:Rattus norvegicus


Alignment Length:246 Identity:73/246 - (29%)
Similarity:112/246 - (45%) Gaps:46/246 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NRIVGGQEAEDGVAPYQVSIQTIWK--THICSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDR 95
            ::||||.||.....||..|:|....  :|.|.|.:::.:::|||.||..|.|.:.:.:::|.:|.
  Rat   196 SKIVGGHEARPHSRPYVASLQLSRSPGSHFCGGTLIHPRFVLTAAHCLQDISWQLVTVVLGAHDL 260

  Fly    96 L--EPGQTLF-----------PDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRTQIVELSREQ 147
            |  ||.|..|           |:|.|            ||:.|:.:|.......:..:..|.::.
  Rat   261 LSSEPEQQKFTITQVFENNYNPEETL------------NDVLLLQLNRPASLGKQVAVASLPQQD 313

  Fly   148 P--PAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHICTFT-REGEG 209
            .  ..|:.....|||...:..||.:.|..||:|::.. .|||.          ::||.. |...|
  Rat   314 QSLSQGTQCLAMGWGRLGTRAPTPRVLHELNVTVVTF-LCREH----------NVCTLVPRRAAG 367

  Fly   210 ACSGDSGGPLMWEGKLVGLVNWG-RAC-GVGMPDMYANTVYYQDWIRRTHS 258
            .|.|||||||:..|.|.|:.::. |.| .:..||.:|....|.:||   ||
  Rat   368 ICFGDSGGPLICNGILHGVDSFVIRECASLQFPDFFARVSMYVNWI---HS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 69/238 (29%)
Tryp_SPc 35..256 CDD:238113 71/240 (30%)
Prtn3XP_038934901.1 Tryp_SPc 198..416 CDD:238113 73/244 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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