DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and Tpsb2

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:249 Identity:77/249 - (30%)
Similarity:118/249 - (47%) Gaps:38/249 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 IVGGQEAEDGVAPYQVSIQ---TIWKTHICSGVILNEQWILTAGHC-ALDFSIEDL-RIIVGTND 94
            ||||:||.:...|:|||::   :.| .|.|.|.:::.||:|||.|| .|.....:| |:.:....
  Rat    30 IVGGREASESKWPWQVSLRFKFSFW-MHFCGGSLIHPQWVLTAAHCVGLHIKSPELFRVQLREQY 93

  Fly    95 RLEPGQTLFPDEALVHCLYDIPYVY----NNDIALIHVNESIIFNDRTQIVELS----REQPPAG 151
            .....|.|..:..:||     |:.|    ..||||:.:...:  |..|.|...|    .|..|:|
  Rat    94 LYYADQLLTVNRTVVH-----PHYYTVEDGADIALLELENPV--NVSTHIHPTSLPPASETFPSG 151

  Fly   152 STVTLTGWGAPESSYPTV-QY-LQTLNLTIIAHEECRERWDFHDGIDIGHICTFTREG------- 207
            ::..:||||..:|..|.: .| |:.:.:.|:.:..|..:  :|.|:..|......::|       
  Rat   152 TSCWVTGWGDIDSDEPLLPPYPLKQVKVPIVENSLCDRK--YHTGLYTGDDVPIVQDGMLCAGNT 214

  Fly   208 -EGACSGDSGGPLMWEGK----LVGLVNWGRACG-VGMPDMYANTVYYQDWIRR 255
             ..:|.|||||||:.:.|    ..|:|:||..|. ...|.:|....||.|||.|
  Rat   215 RSDSCQGDSGGPLVCKVKGTWLQAGVVSWGEGCAEANRPGIYTRVTYYLDWIHR 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 77/249 (31%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 76/247 (31%)

Return to query results.
Submit another query.