DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and Gzmm

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_063119183.1 Gene:Gzmm / 29252 RGDID:620022 Length:266 Species:Rattus norvegicus


Alignment Length:245 Identity:69/245 - (28%)
Similarity:117/245 - (47%) Gaps:37/245 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAVRLSLIWLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVI 65
            |.||.||:.||.|.|...|  |.|      .:.:|:||:||.....||.||:|.. |:|:|.||:
  Rat     1 MEVRWSLLLLLALKTLWAV--GNR------FEAQIIGGREAVPHSRPYMVSLQNT-KSHVCGGVL 56

  Fly    66 LNEQWILTAGHCALDFSIEDLRIIVG---TNDRLEPGQTLFPDEALVHCLYDIPYVYNNDIALIH 127
            ::::|:|||.|| |...::.|:::.|   .:|..:||.|.:..:|:.|..|::.  |.||:||:.
  Rat    57 VHQKWVLTAAHC-LSEPLQQLKLVFGLHSLHDPQDPGLTFYIKQAIKHPGYNLK--YENDLALLK 118

  Fly   128 VNESIIFNDRTQIVEL---SREQPPAGSTVTLTGWGAPESSYPTVQYLQTLNLTIIAHEECRERW 189
            ::..:..:...:.:.|   .|::|..||..:..|||.........:.||.|:|.::....|....
  Rat   119 LDGRVKPSKNVKPLALPRKPRDKPAEGSRCSTAGWGITHQRGQLAKSLQELDLRLLDTRMCNNSR 183

  Fly   190 DFHDGIDIGHICTFT-REGEGACSGDSGGPLMWEGKLVG------LVNWG 232
            .::..:....:|... .:|:..|            |:.|      |..||
  Rat   184 FWNGVLTDSMLCLKAGAKGQAPC------------KVTGVAWNQPLTPWG 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 57/211 (27%)
GzmmXP_063119183.1 None

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