DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and Prss54

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_038953481.1 Gene:Prss54 / 291846 RGDID:1307877 Length:384 Species:Rattus norvegicus


Alignment Length:235 Identity:59/235 - (25%)
Similarity:97/235 - (41%) Gaps:51/235 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PYQVSIQTIWKTHICSGVILNEQWILTAGHCALDFSIEDLRIIVGTNDRLEPGQTLFPDEALVHC 111
            |:.||||....||:..|.||:|.|||:.. .||....|.:.::...|  ::|...       .|.
  Rat    44 PWVVSIQDKQYTHLAFGCILSEFWILSTA-SALQNRKEVIAVVGIAN--MDPRNA-------DHK 98

  Fly   112 LYDIPYV-----YN-----NDIALIHVNESIIFNDRTQ---IVELSREQPPAGSTVTLTGWGAPE 163
            .|.|..:     :|     |:|||:..:.:|.|:|..|   .:..|..:|.|.....:.||. |.
  Rat    99 EYSINAIIPHENFNNNSMRNNIALLRTDSAIHFDDLVQPICFLGKSLHKPTALKNCWVAGWN-PT 162

  Fly   164 S-----SYPTVQYLQTLNLTII----AHEECRERWDFHDGIDIGHICTFTREGEGACSGDSGGPL 219
            |     ::.|:..|:.:::..|    .|.:.:.....|           |.:....|.|:.|.|:
  Rat   163 SAVNTGNHMTMSILRRISVNDIEVCPLHRQQKTECASH-----------TNKDSNVCLGEPGNPM 216

  Fly   220 MWEGK------LVGLVNWGRACGVGMPDMYANTVYYQDWI 253
            |.:.|      |.||:.:|.....|:. :|.:...|.:||
  Rat   217 MCQVKKLDLWILRGLLAYGSDLCPGLL-LYTSVDDYSNWI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 59/235 (25%)
Prss54XP_038953481.1 Tryp_SPc 42..255 CDD:473915 57/233 (24%)

Return to query results.
Submit another query.