DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and LOC286960

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:LOC286960 / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:233 Identity:70/233 - (30%)
Similarity:115/233 - (49%) Gaps:18/233 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILTAGHCALDFSIEDLRIIVGTND-- 94
            |::||||......:.|||||:.. ..:|.|.|.::::||:|:|.||..    ..|::.:|.::  
  Rat    21 DDKIVGGYTCPKHLVPYQVSLHD-GISHQCGGSLISDQWVLSAAHCYK----RKLQVRLGEHNIH 80

  Fly    95 RLEPGQTLFPDEALV-HCLYDIPYVYNNDIALIHVNESIIFNDRTQIVELSREQPPAGSTVTLTG 158
            .||.|:.....|.:: |..|: ....:|||.||.:....:.|.:...|.|.|......:...::|
  Rat    81 VLEGGEQFIDAEKIIRHPEYN-KDTLDNDIMLIKLKSPAVLNSQVSTVSLPRSCASTDAQCLVSG 144

  Fly   159 WGAPES---SYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHICT-FTREGEGACSGDSGGPL 219
            ||...|   .||.:  ||.|...:::...|::  .:...|.....|. |...|:.:|.||||||:
  Rat   145 WGNTVSIGGKYPAL--LQCLEAPVLSASSCKK--SYPGQITSNMFCLGFLEGGKDSCDGDSGGPV 205

  Fly   220 MWEGKLVGLVNWGRACGV-GMPDMYANTVYYQDWIRRT 256
            :..|::.|:|:||..|.: |.|.:|.....|..||:.|
  Rat   206 VCNGEIQGIVSWGSVCAMRGKPGVYTKVCNYLSWIQET 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 66/226 (29%)
Tryp_SPc 35..256 CDD:238113 68/228 (30%)
LOC286960NP_775423.1 Tryp_SPc 23..240 CDD:214473 66/226 (29%)
Tryp_SPc 24..243 CDD:238113 68/228 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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