DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4053 and CG18420

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:295 Identity:72/295 - (24%)
Similarity:130/295 - (44%) Gaps:72/295 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLIWLL----LLGTS--IDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGV 64
            |::.||    |||::  :|...|.|...:  |..|||.|:.|....:|:...:.|.....||.|.
  Fly    10 SILLLLTVFPLLGSTQFLDSECGTRSPLK--LGPRIVNGKVAVRNSSPWMAFLHTSSNQFICGGT 72

  Fly    65 ILNEQWILTAGHCALDFSIEDLRIIV--GTNDRLEPGQTLFPDEALV-----HCLYDIPYVYNND 122
            :::.:.:|||.||    .|.:..|:|  |..:|...|   :.:|..|     |..|| |..:.||
  Fly    73 LISRRLVLTAAHC----FIPNTTIVVRLGEYNRKLKG---YREEHQVNRTFQHRFYD-PNTHAND 129

  Fly   123 IALIHVNESIIFNDRTQIVELS-----REQPPAGSTVTLTGWGAPESSYPTVQYLQTLNL----- 177
            |||:.:..::::....:.:.:.     :....:...:|.||||..||.:.:.: |:||::     
  Fly   130 IALLRLVSNVVYKANIRPICIMWDASWKHHIDSIKVLTGTGWGRTESMHDSSE-LRTLDISRQPS 193

  Fly   178 ------TIIAHEECRERWDFHDGIDIGHICTFTREGEGACSGDSGGPLMWEGKLVGLVNWGRACG 236
                  ::::::.|...|:                 ...|.||:|||:   |.:|...|..|...
  Fly   194 KMCAFGSVLSNQFCAGNWN-----------------SNLCIGDTGGPV---GAMVRYRNAFRFVQ 238

  Fly   237 VGM---------PDMYANTVYYQDWIRR---THSG 259
            ||:         |.::.:.:.:.::|||   |.:|
  Fly   239 VGIAITNKRCQRPSVFTDVMSHIEFIRRIFLTQNG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 57/250 (23%)
Tryp_SPc 35..256 CDD:238113 59/255 (23%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 57/250 (23%)
Tryp_SPc 43..267 CDD:238113 58/252 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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