DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and Tmprss4

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_663378.1 Gene:Tmprss4 / 214523 MGIID:2384877 Length:435 Species:Mus musculus


Alignment Length:272 Identity:83/272 - (30%)
Similarity:116/272 - (42%) Gaps:51/272 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IDVTRGKR------------LD-NRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNE 68
            :.|..|.|            || .:.|...|:|||.||.....|:||||| ..|.|:|.|.||:.
Mouse   172 LQVQNGSRSCLSGSLVSLRCLDCGKSLKTPRVVGGVEAPVDSWPWQVSIQ-YNKQHVCGGSILDP 235

  Fly    69 QWILTAGHC---ALDFSIEDLRI---IVGTNDRL--------EPGQTLFPDEALVHCLYDIPYVY 119
            .|||||.||   .||.|...:|.   |:|.:..|        || ..|:|.|             
Mouse   236 HWILTAAHCFRKYLDVSSWKVRAGSNILGNSPSLPVAKIFIAEP-NPLYPKE------------- 286

  Fly   120 NNDIALIHVNESIIFND--RTQIVELSREQPPAGSTVTLTGWG-APESSYPTVQYLQTLNLTIIA 181
             .||||:.:...:.|:.  |...:..|.|.....:.|.:.||| ..|:.......|...::.:|.
Mouse   287 -KDIALVKLQMPLTFSGSVRPICLPFSDEVLVPATPVWVIGWGFTEENGGKMSDMLLQASVQVID 350

  Fly   182 HEECRERWDFHDGIDIGHICTFTRE-GEGACSGDSGGPLMWEG---KLVGLVNWGRAC-GVGMPD 241
            ...|.....:...:....:|..|.: |:..|.||||||||:..   ::||:|:||..| |...|.
Mouse   351 STRCNAEDAYEGEVTAEMLCAGTPQGGKDTCQGDSGGPLMYHSDKWQVVGIVSWGHGCGGPSTPG 415

  Fly   242 MYANTVYYQDWI 253
            :|.....|.:||
Mouse   416 VYTKVTAYLNWI 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 75/240 (31%)
Tryp_SPc 35..256 CDD:238113 76/241 (32%)
Tmprss4NP_663378.1 LDLa 56..90 CDD:238060
SRCR_2 106..195 CDD:295335 5/22 (23%)
Tryp_SPc 202..427 CDD:214473 75/240 (31%)
Tryp_SPc 203..430 CDD:238113 76/241 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837521
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.