DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and CG42694

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001188994.1 Gene:CG42694 / 10178792 FlyBaseID:FBgn0261584 Length:512 Species:Drosophila melanogaster


Alignment Length:306 Identity:57/306 - (18%)
Similarity:110/306 - (35%) Gaps:97/306 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WLLLLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHI-------CSGVIL 66
            |||:|      |..:...|.|.||: ..|...:...:...: ..|..|..||       |||.::
  Fly     7 WLLML------TVLQSHVNSKFLDD-YCGAPISNQSITKLR-QPQAGWLAHISNGTHVLCSGSLI 63

  Fly    67 NEQWILTAGHCALD--------------------FSIEDLRIIVGTNDRLEPGQTLFPDEALVHC 111
            ::|::|:|..| :|                    :::.::.|...:..||:              
  Fly    64 SKQFVLSAAQC-IDVHGKLFVQLGVSNATKSPHWYTVSNVVIPSHSGKRLQ-------------- 113

  Fly   112 LYDIPYVYNNDIALIHVNESIIFND---------RTQIVELSREQPPAGSTVTLTGWGAPESSYP 167
                     .||.|:.:::|:.:||         .|..:::.:    .....|.:.| ..::..|
  Fly   114 ---------RDIGLLKLSQSVDYNDFVYPICIALNTNTLDMVK----ILQNFTTSAW-LSKNKNP 164

  Fly   168 TVQYLQTLNLTIIAHEECRERWDFHDGIDIGHICTFTREGEGACSGDSGG----PLMWEGKLV-- 226
                 ||:.|:.::.:.|  :.:....:....||..:.:...:|..|||.    |::....:|  
  Fly   165 -----QTIVLSQLSRDRC--KLNLSGNVTPKEICAASLQRNNSCFIDSGSALTQPIIQGSNIVRE 222

  Fly   227 ------GLVNWGRACGVGMPDMYANTVYYQDWIR---RTHSGCKNR 263
                  |.||....|  ..|.:|.:......||.   :.:.|..:|
  Fly   223 MLFGIRGYVNGRSWC--SEPAIYIDVAECVGWIETVVQQYDGTDSR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 46/271 (17%)
CG42694NP_001188994.1 Tryp_SPc 46..253 CDD:473915 42/244 (17%)
Tryp_SPc 319..502 CDD:473915
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.