DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and LOC100495541

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_031749237.1 Gene:LOC100495541 / 100495541 XenbaseID:XB-GENE-29082731 Length:659 Species:Xenopus tropicalis


Alignment Length:292 Identity:89/292 - (30%)
Similarity:130/292 - (44%) Gaps:39/292 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSLIWLLL-----LGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWK-THICSG 63
            ::|.:|||     |......|....:....||.||||||..|.:|..|:|||::  :| .|||.|
 Frog     9 VTLTFLLLSFSPHLSLCRXTTAAPLVCGSPLLPNRIVGGSAATEGAWPWQVSLR--YKGIHICGG 71

  Fly    64 VILNEQWILTAGHCAL-DFSIEDLRIIVGTN--DRLEPGQTLFP-DEALVHCLYDIPYVYNNDIA 124
            .::...|||||.||.| ..|..|..:.:|..  ....|.:..:. |..:|:..:|....| .|||
 Frog    72 SVIGTHWILTAAHCFLISQSPSDFEVRLGAYQLSLTSPNEITYKVDRIIVNSQFDSSSHY-GDIA 135

  Fly   125 LIHVNESIIFNDRTQIVEL--SREQPPAGSTVTLTGWG--APESSYPTVQYLQTLNLTIIAHEEC 185
            ||.....|.:......|.|  :....|.|....:||||  |.:.:.|..|.||.:...:|:...|
 Frog   136 LIRPTSPITYTPYILPVCLPSTSNSFPEGMECWVTGWGTTAFQVNLPYPQTLQQVMTPLISRTSC 200

  Fly   186 RERWDFHDGIDI---------GHICTFTREGE-GACSGDSGGPL------MWEGKLVGLVNWGRA 234
            .:.  :|.|.::         ..||.....|: .:|.|||||||      :|  ..:|.|.||..
 Frog   201 DQM--YHIGTNVPSSTAIIPSDQICAGYAAGQKDSCQGDSGGPLVCKLQGIW--YQIGFVTWGDG 261

  Fly   235 CGV-GMPDMYANTVYYQDWIRRTHSGCKNRVN 265
            |.: ..|.:|.....||.|: .:::..:|.||
 Frog   262 CAIANRPGVYTLVPAYQSWL-SSYNATENTVN 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 76/246 (31%)
LOC100495541XP_031749237.1 Tryp_SPc 44..283 CDD:238113 76/246 (31%)
Tryp_SPc 362..595 CDD:238113
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.