DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and LOC100485189

DIOPT Version :9

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_002941065.2 Gene:LOC100485189 / 100485189 -ID:- Length:249 Species:Xenopus tropicalis


Alignment Length:254 Identity:75/254 - (29%)
Similarity:123/254 - (48%) Gaps:28/254 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILTAGH 76
            ||||::..         :..| ||:||.|......|:..|:. .:..|:|.||:::|.|:|||.|
 Frog     9 LLGTAVQA---------RYYD-RIIGGTECRPNSQPWHCSLY-YFDQHVCGGVLIDENWVLTAAH 62

  Fly    77 CALDFSIEDLRIIVGT-NDRLEPG--QTLFPDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRT 138
            |.|    ..|::.:|. |..:..|  |..:.::...|..:: |..::|||.|:.:...:..||..
 Frog    63 CQL----SSLQVRLGEHNLAVYEGKEQFSYAEKMCPHSGFN-PITFDNDIMLLKLVSPVTINDYV 122

  Fly   139 QIVELSREQPPAGSTVTLTGWG---APESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHI 200
            |.:.|.......|.|..::|||   :||.::|  ..||.:.:..::.:.|:..:. .|.|....:
 Frog   123 QTIPLGCPTVGDGETCLVSGWGTTTSPEETFP--DELQCVEVQTVSQDYCQGAFP-TDEITDNML 184

  Fly   201 CTFTRE-GEGACSGDSGGPLMWEGKLVGLVNWGRA-CGV-GMPDMYANTVYYQDWIRRT 256
            |....| |:.:|.|||||||:....:.|:.:||.. ||| ..|.:|.....|..||:.|
 Frog   185 CAGVMEGGKDSCQGDSGGPLVCNSMVHGITSWGNTPCGVANKPGIYTKICNYIAWIQDT 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 34..253 CDD:214473 67/227 (30%)
Tryp_SPc 35..256 CDD:238113 68/229 (30%)
LOC100485189XP_002941065.2 Tryp_SPc 22..243 CDD:238113 68/229 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.