DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4053 and LOC100485189

DIOPT Version :10

Sequence 1:NP_650601.2 Gene:CG4053 / 42070 FlyBaseID:FBgn0038482 Length:265 Species:Drosophila melanogaster
Sequence 2:XP_002941065.2 Gene:LOC100485189 / 100485189 XenbaseID:XB-GENE-29077659 Length:249 Species:Xenopus tropicalis


Alignment Length:254 Identity:75/254 - (29%)
Similarity:123/254 - (48%) Gaps:28/254 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLGTSIDVTRGKRLDNRKLLDNRIVGGQEAEDGVAPYQVSIQTIWKTHICSGVILNEQWILTAGH 76
            ||||::..         :..| ||:||.|......|:..|:. .:..|:|.||:::|.|:|||.|
 Frog     9 LLGTAVQA---------RYYD-RIIGGTECRPNSQPWHCSLY-YFDQHVCGGVLIDENWVLTAAH 62

  Fly    77 CALDFSIEDLRIIVGT-NDRLEPG--QTLFPDEALVHCLYDIPYVYNNDIALIHVNESIIFNDRT 138
            |.|    ..|::.:|. |..:..|  |..:.::...|..:: |..::|||.|:.:...:..||..
 Frog    63 CQL----SSLQVRLGEHNLAVYEGKEQFSYAEKMCPHSGFN-PITFDNDIMLLKLVSPVTINDYV 122

  Fly   139 QIVELSREQPPAGSTVTLTGWG---APESSYPTVQYLQTLNLTIIAHEECRERWDFHDGIDIGHI 200
            |.:.|.......|.|..::|||   :||.::|  ..||.:.:..::.:.|:..:. .|.|....:
 Frog   123 QTIPLGCPTVGDGETCLVSGWGTTTSPEETFP--DELQCVEVQTVSQDYCQGAFP-TDEITDNML 184

  Fly   201 CTFTRE-GEGACSGDSGGPLMWEGKLVGLVNWGRA-CGV-GMPDMYANTVYYQDWIRRT 256
            |....| |:.:|.|||||||:....:.|:.:||.. ||| ..|.:|.....|..||:.|
 Frog   185 CAGVMEGGKDSCQGDSGGPLVCNSMVHGITSWGNTPCGVANKPGIYTKICNYIAWIQDT 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4053NP_650601.2 Tryp_SPc 35..256 CDD:238113 68/229 (30%)
LOC100485189XP_002941065.2 Tryp_SPc 22..243 CDD:238113 68/229 (30%)

Return to query results.
Submit another query.