DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17475 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:236 Identity:78/236 - (33%)
Similarity:104/236 - (44%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QNRVINGEDVQLGEAKYQISLQGMYGGHICGGCIIDERHVLTAAHCVYGYNPTYLRVITGTVEYE 111
            :.|:|.|...:.|:..:|:||| :...|.|||.:|....|||||||...|:.......|..|...
  Rat   183 EERIIGGTQAETGDWPWQVSLQ-LNNVHHCGGTLISNLWVLTAAHCFRSYSNPQQWTATFGVSTI 246

  Fly   112 KPDAVYFVEEHWIHCNYNSPDYHNDIALIRLNDTIKFNEYTQPAELPTAPVANGTQLLL------ 170
            .|.....|.....|..|||....||||:::|:..:.|........||.|     ||.::      
  Rat   247 SPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPVTFTRNIHRVCLPAA-----TQNIIPDSVAY 306

  Fly   171 -TGWGSTELWGDTPDILQKAYLTHVVYSTCQEIMNNDPSNGPCHICT-LTTGGQGACHGDSGGPL 233
             |||||....|:|...||:..:..|....|.|......|..|..:|. :.:|...||.|||||||
  Rat   307 VTGWGSLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGGSVLPGMLCAGVRSGAVDACQGDSGGPL 371

  Fly   234 THNGV-----LYGLVNWGYPCAL-GVPDSHANVYYYLEWIR 268
            .....     :.|:|:|||.|.| ..|..:..|..|..|||
  Rat   372 VQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWIR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 77/233 (33%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 77/233 (33%)
Blue background indicates that the domain is not in the aligned region.

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