DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17475 and CG5909

DIOPT Version :10

Sequence 1:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_651544.1 Gene:CG5909 / 43274 FlyBaseID:FBgn0039495 Length:381 Species:Drosophila melanogaster


Alignment Length:276 Identity:79/276 - (28%)
Similarity:120/276 - (43%) Gaps:60/276 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EGVNFQNRVIN-----------GEDVQLGE------AKYQISLQGMYGGHICGGCIIDERHVLTA 89
            :|:...|.|.|           |:..:.|:      .||:|:....:.   |||.:|.|||:|||
  Fly   111 QGLQLLNSVTNCGNKGNPKVSGGKTARPGDFPWVALLKYKINDPRPFR---CGGSLISERHILTA 172

  Fly    90 AHCVYGYNPTYLRVITGTVEYEK----------------PDAVYFVEEHWIHCNYNSPDYHNDIA 138
            |||:.. .|..:.|..|..:.|.                |...|.:|:..:|.||......:|:|
  Fly   173 AHCIID-QPEVIAVRLGEHDLESEEDCHYLGGTNRVCIPPYEEYGIEQIRVHPNYVHGKISHDVA 236

  Fly   139 LIRLNDTIKFNEYTQPAELPTAPVANGTQLL-------LTGWGSTELWGDTPDILQKAYLTHVVY 196
            :|:|:..:|...:.:|..|   |:...:|.|       :.|||.||. ......||:|.:|....
  Fly   237 IIKLDRVVKEKSHIKPVCL---PIDQKSQELDFDQSFFVAGWGGTEK-ETVATKLQQALITRKSL 297

  Fly   197 STCQEIMN-NDPSNGPCHICTLTTGGQGACHGDSGGPL--------THNGVLYGLVNW-GYPCAL 251
            :.|::..| .:.|:.  |||...||.:..|.||||||:        |:..|.||:|:: |..|..
  Fly   298 NECRQYYNKGEVSDN--HICATGTGIKHTCQGDSGGPVFFKHRFKNTYRVVQYGVVSFGGRLCGQ 360

  Fly   252 GVPDSHANVYYYLEWI 267
            ..|...|:|...|.||
  Fly   361 NQPGVFASVIDMLPWI 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 77/268 (29%)
CG5909NP_651544.1 CLIP 25..82 CDD:197829
Tryp_SPc 132..379 CDD:238113 75/255 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.