DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17475 and modSP

DIOPT Version :10

Sequence 1:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_536776.2 Gene:modSP / 42032 FlyBaseID:FBgn0051217 Length:628 Species:Drosophila melanogaster


Alignment Length:200 Identity:53/200 - (26%)
Similarity:77/200 - (38%) Gaps:50/200 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GMYGGH-------ICGGCIIDERHVLTAAHCVYG------YNPTYLRVITG--------TVEYEK 112
            |:|..|       .|||.::....|:|||||||.      |:....|||..        |...||
  Fly   385 GLYVWHNEKDYHFQCGGSLLTPDLVITAAHCVYDEGTRLPYSYDTFRVIAAKFYRNYGETTPEEK 449

  Fly   113 PDAVYFVEEHWIHCNY--NSPDYHNDIALIRLNDTIKFNEYTQPAELPTA------PVANGTQLL 169
            ...|..:|   |...|  .:.:|:.|:||:.|::..:.:...:|..:..|      .|.:..|..
  Fly   450 RRDVRLIE---IAPGYKGRTENYYQDLALLTLDEPFELSHVIRPICVTFASFAEKESVTDDVQGK 511

  Fly   170 LTGWGSTELWGDTPDILQKAYLTHV-----VYSTCQEIMNNDPSNGPCHICTLTTGGQGACHGDS 229
            ..||          :|..|..|..|     ..|.|:..:.:..::   ..|..|.|...||.|||
  Fly   512 FAGW----------NIENKHELQFVPAVSKSNSVCRRNLRDIQAD---KFCIFTQGKSLACQGDS 563

  Fly   230 GGPLT 234
            ||..|
  Fly   564 GGGFT 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 52/199 (26%)
modSPNP_536776.2 LDLa 27..58 CDD:197566
LDLa 70..101 CDD:197566
LDLa 123..157 CDD:197566
LDLa 167..199 CDD:238060
CCP <251..284 CDD:153056
Tryp_SPc 371..616 CDD:214473 52/199 (26%)
Blue background indicates that the domain is not in the aligned region.

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