DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17475 and CG8870

DIOPT Version :9

Sequence 1:NP_001287372.1 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_731802.1 Gene:CG8870 / 41645 FlyBaseID:FBgn0038144 Length:356 Species:Drosophila melanogaster


Alignment Length:236 Identity:64/236 - (27%)
Similarity:97/236 - (41%) Gaps:45/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 CGGCIIDERHVLTAAHCV------YGY--------------NPTYLRVITGTVEYEKPDAVYFVE 120
            |||.:|:..:||||||||      |.|              ||. ..::.|..:|........|:
  Fly   117 CGGSLINNWYVLTAAHCVEYPFMDYPYALKTVRLGEHNTSTNPD-RAIVNGRRQYAPLYMEIEVD 180

  Fly   121 EHWIHCNYN-SPDYHNDIALIRLNDTIKFNEYTQPAELPTAP--VANGTQLLLTGW---GSTELW 179
            :...|..:| .....|||||:||...:::....||..||.|.  .|:..:...:||   |.    
  Fly   181 QIITHEQFNRGRRLINDIALVRLKFPVRYTRAIQPICLPRAQKLAAHKRKFQASGWPDMGQ---- 241

  Fly   180 GDTPDILQKAYLTHVVYSTCQEIMNNDPSNGPCHICTLTTGGQGACHGDSGGPLTHNGV------ 238
            |...::|.::::.......|:   :|...|....||.....|.....|||||||....:      
  Fly   242 GIASEVLLRSFIAERHPDVCK---SNYDFNLGSQICAGGLDGNDTSPGDSGGPLMETVIRGKVTL 303

  Fly   239 --LYGLVNWGY-PCALGV--PDSHANVYYYLEWIRSMISGP 274
              ..|::::|. ||.|..  |..:....|:.|||:|.:..|
  Fly   304 TYAAGIISYGQKPCVLKTCKPAFYTKTSYFFEWIKSKLQSP 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_001287372.1 Tryp_SPc 49..267 CDD:214473 60/227 (26%)
Tryp_SPc 50..269 CDD:238113 62/229 (27%)
CG8870NP_731802.1 Tryp_SPc 93..340 CDD:238113 62/230 (27%)
Tryp_SPc 93..337 CDD:214473 60/227 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437241
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.