DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17475 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:236 Identity:84/236 - (35%)
Similarity:123/236 - (52%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NRVINGEDVQLGEAKYQISLQGMYGGHICGGCIIDERHVLTAAHC-VYGYNPTYLRVITGTVEYE 111
            ::|..|:|.:.||..:|.||| ....|.||..:|....::||||| |...||...:|..|.: ..
  Rat   198 HKVAGGQDAEEGEWPWQASLQ-QNNVHRCGATLISNSWLITAAHCFVRSANPKDWKVSFGFL-LS 260

  Fly   112 KPDAVYFVEEHWIHCNYNSPDYHNDIALIRLNDTIKFNEYTQPAELP--TAPVANGTQLLLTGWG 174
            ||.|...|:...||.||:.|.::||||::||:..:.:....:.|.||  |......:.:::||||
  Rat   261 KPQAQRAVKSIVIHENYSYPAHNNDIAVVRLSSPVLYENNIRRACLPEATQKFPPNSDVVVTGWG 325

  Fly   175 STELWGDTPDILQKAYLTHVVYSTCQEIMNNDPSNG----PCHICT-LTTGGQGACHGDSGGPLT 234
            :.:..||:|:||||..:..:...||    |:..:.|    |..:|. ...|...||.|||||||.
  Rat   326 TLKSDGDSPNILQKGRVKIIDNKTC----NSGKAYGGVITPGMLCAGFLEGRVDACQGDSGGPLV 386

  Fly   235 ---HNGV--LYGLVNWGYPCAL-GVPDSHANVYYYLEWIRS 269
               ..|:  |.|:|:||..||| ..|..:..|.:|.:||.|
  Rat   387 SEDSKGIWFLAGIVSWGDECALPNKPGVYTRVTHYRDWISS 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 83/232 (36%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 84/234 (36%)
Blue background indicates that the domain is not in the aligned region.

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