DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17475 and Tmprss4

DIOPT Version :10

Sequence 1:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:241 Identity:75/241 - (31%)
Similarity:113/241 - (46%) Gaps:37/241 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 RVINGEDVQLGEAKYQISLQGMYG-GHICGGCIIDERHVLTAAHCVYGY-NPTYLRVITGTVEY- 110
            ||:.|.:.......:|:|:|  |. .|:|||.|:|...:||||||...| :.:..:|..|:.:. 
  Rat   245 RVVGGVEASADSWPWQVSIQ--YNKQHVCGGSILDHHWILTAAHCFRKYLDVSSWKVRAGSNKLG 307

  Fly   111 ---EKPDAVYFVEEHWIHCNYNSPDYHNDIALIRLNDTIKFNEYTQPAEL--------PTAPVAN 164
               ..|.|..|:.|.    |...|. ..||||::|...:.|:...:|..|        ||.||  
  Rat   308 NSPSLPVAKIFIAEP----NPLQPK-EKDIALVKLKMPLTFSGSVRPICLPFSDEELIPTMPV-- 365

  Fly   165 GTQLLLTGWGST-ELWGDTPDILQKAYLTHVVYSTC--QEIMNNDPSNGPCHICTLT-TGGQGAC 225
                .:.|||.| |..|...|.|.:|.:..:..:.|  ::....:.:.|  .:|..| .||:..|
  Rat   366 ----WVIGWGFTEENGGKMSDTLLQASVQVIDSARCNAEDAYQGEVTAG--MLCAGTPQGGKDTC 424

  Fly   226 HGDSGGPLTHN---GVLYGLVNWGYPC-ALGVPDSHANVYYYLEWI 267
            .|||||||.::   ..:.|:|:|||.| :...|..:..|..||:||
  Rat   425 QGDSGGPLMYHYDKWQVVGIVSWGYGCGSPSTPGVYTKVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 74/240 (31%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597
Tryp_SPc 245..470 CDD:214473 73/239 (31%)
Blue background indicates that the domain is not in the aligned region.

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