DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17475 and LOC312273

DIOPT Version :9

Sequence 1:NP_001287372.1 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001101326.1 Gene:LOC312273 / 312273 RGDID:1563848 Length:246 Species:Rattus norvegicus


Alignment Length:235 Identity:80/235 - (34%)
Similarity:115/235 - (48%) Gaps:23/235 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 NRVINGEDVQLGEAKYQISLQGMYGGHICGGCIIDERHVLTAAHCVYGYNPTYLRVITGTVE-YE 111
            :|::.|...|.....||:||..  |.|||||.:|.::.||:||||   |:| .|:|..|... ||
  Rat    23 DRIVGGYTCQEHSVPYQVSLNA--GSHICGGSLITDQWVLSAAHC---YHP-QLQVRLGEHNIYE 81

  Fly   112 KPDAVYFVE--EHWIHCNYNSPDYHNDIALIRLNDTIKFNEYTQPAELPTAPVANGTQLLLTGWG 174
            ...|..|::  :..:|.:|:.....|||.||:|......|.......||......||:.|::|||
  Rat    82 IEGAEQFIDAAKMILHPDYDKWTVDNDIMLIKLKSPATLNSKVSTIPLPQYCPTAGTECLVSGWG 146

  Fly   175 STELWGDTPDILQKAYLTHVVYSTC-----QEIMNNDPSNGPCHICT-LTTGGQGACHGDSGGPL 233
            ..:...::|.:||......:..|.|     ::|.||       ..|. ...||:.:|..|||||:
  Rat   147 VLKFGFESPSVLQCLDAPVLSDSVCHKAYPRQITNN-------MFCLGFLEGGKDSCQYDSGGPV 204

  Fly   234 THNGVLYGLVNWGYPCAL-GVPDSHANVYYYLEWIRSMIS 272
            ..||.:.|:|:||..||| |.|..:..|..||.||...|:
  Rat   205 VCNGEVQGIVSWGDGCALEGKPGVYTKVCNYLNWIHQTIA 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_001287372.1 Tryp_SPc 49..267 CDD:214473 77/227 (34%)
Tryp_SPc 50..269 CDD:238113 78/228 (34%)
LOC312273NP_001101326.1 Tryp_SPc 25..242 CDD:238113 78/229 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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