DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17475 and CG43335

DIOPT Version :10

Sequence 1:NP_650600.2 Gene:CG17475 / 42069 FlyBaseID:FBgn0038481 Length:288 Species:Drosophila melanogaster
Sequence 2:NP_001247121.1 Gene:CG43335 / 12798413 FlyBaseID:FBgn0263040 Length:281 Species:Drosophila melanogaster


Alignment Length:260 Identity:68/260 - (26%)
Similarity:111/260 - (42%) Gaps:55/260 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QNRVINGEDVQLGEAKYQISLQGMYGGHICGGCIIDERHVLTAAHCVYGYNPTYLRVITGTVEYE 111
            :.|:|.|.|.::....:...|...: .:.|.|.:|..:.|||||||:.......:|:  |.....
  Fly    39 RTRIIGGSDAEITSHPWMAYLYNEF-HYFCAGTLITNQFVLTAAHCIEASKNLTVRL--GGSGLT 100

  Fly   112 KPDAVYFVEEHWIHCNYNSPDYH----------------NDIALIRLNDTIKFNEYTQPAELPTA 160
            :.|...        |...:.||.                ||||:|||..|:||.::.:|..:...
  Fly   101 RSDGSM--------CQITAEDYSVSMAIKHKYFTPSIMLNDIAMIRLARTVKFYDHIRPICIILD 157

  Fly   161 P-----VANGTQLLLTGWGSTELWGDTPDILQKAYLTHVVYSTCQEIMNNDPSNGPCHICTLTTG 220
            |     :.:|..|:.||||..:. ...|.:||:|.:|.:..:.|.::.:...:.|  .||   .|
  Fly   158 PAVRLLLEDGMTLMATGWGLADK-RMHPHLLQEAPITVMNRNVCSKLYDVAITQG--QIC---AG 216

  Fly   221 GQ--GACHGDSGGPLTHNGVL----------YGLVNWG-YPCALGVPDSHANVYYYLEWIRSMIS 272
            .:  ..|.|||||||  .||:          ||:.::| ..|.  .|..:.::..|..||..::|
  Fly   217 DKETNTCLGDSGGPL--GGVVNYYGDLRFVQYGITSFGDIECR--SPSIYTDLSTYSGWINMVVS 277

  Fly   273  272
              Fly   278  277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17475NP_650600.2 Tryp_SPc 50..269 CDD:238113 66/252 (26%)
CG43335NP_001247121.1 Tryp_SPc 42..275 CDD:238113 66/253 (26%)

Return to query results.
Submit another query.