DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and LOC560023

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_021325702.2 Gene:LOC560023 / 560023 -ID:- Length:271 Species:Danio rerio


Alignment Length:272 Identity:81/272 - (29%)
Similarity:121/272 - (44%) Gaps:44/272 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LARFLFYILVFSSLYCDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAG 67
            :|:.|:..||.:.:..|  |....|:|||........|||||| :...|.|||.:|..:|::||.
Zfish    22 MAQLLWVFLVLAVMVRD--AFSQRIIGGQEVVPYSIKYQVSLQ-VDRKHFCGGTLIQPQWVLTAA 83

  Fly    68 HCVKGYPTSRLQVATGTIRYA-EPG--AVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALT 129
            ||.:  |.|.:||.......| |.|  .|.....::.|..|:...:.|||.::.|......||..
Zfish    84 HCWR--PASVIQVVLSEHNLAVEEGFEQVCTVAKVFSHVAYNPKTFNNDIMIIKLTAPAQINAYV 146

  Fly   130 QAVELPTSPFPR--GASELVFTGWGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLEL-GP 191
            |...|||:..|.  |.|....:|||           :.|:...:| ||...::     |:|: ..
Zfish   147 QPALLPTADTPELAGGSSCTVSGWG-----------VTRLYNFYL-SPILRAV-----DVEIFSS 194

  Fly   192 CHICAYRQANIG------------ACHGDSGGPLVHQGTLVGILNFFVPCA-QGVPDIFMNIMYY 243
            |.:..|.:.|..            :|.|||||||:..|.|.||:::.:.|| ...|.::..:..|
Zfish   195 CQLYYYYRVNDNMICAGSRFGGKDSCQGDSGGPLICDGYLEGIVSWGIGCALPYYPGVYTKVRNY 259

  Fly   244 R---DWMRQTMS 252
            .   ||:..|.|
Zfish   260 NRWIDWIISTES 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 73/244 (30%)
LOC560023XP_021325702.2 None

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