DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and cfd

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001018368.1 Gene:cfd / 553553 ZFINID:ZDB-GENE-050522-411 Length:249 Species:Danio rerio


Alignment Length:259 Identity:74/259 - (28%)
Similarity:120/259 - (46%) Gaps:28/259 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RFLFYILVFSSLY----CDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIIT 65
            |.:|:.::|.:.:    |        |.|||.|.....||..|:| ..|.|.|||.:||.:|:::
Zfish     3 RLIFFSVLFYAAFHTGDC--------ITGGQEAKAHSRPYMASVQ-WNGKHECGGFLISSQWVMS 58

  Fly    66 AGHCVKGYPTSRLQVATG--TIRYAEPGAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNAL 128
            |.||.:...||.::|..|  ::..||.....:...:|.|.::....|.|||.|:.|::.:|.:..
Zfish    59 AAHCFQDGRTSGVKVVLGAHSLSGAEDTKQTFDAEVYNHPDFSISNYDNDIALIKLDKPVTQSDA 123

  Fly   129 TQAVEL--PTSPFPRGASELVFTGWGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDL---E 188
            .:.|:.  ..:..|:.|:.:...||||.:..|..|.:|     ..|:.|..|.......|.   :
Zfish   124 VKPVKFQRDETADPKEAAVVETAGWGSLNNMGGRPDKL-----HELSIPVMERWRCGRADFYGEK 183

  Fly   189 LGPCHICAYRQANIGACHGDSGGPLVHQGTLVGIL-NFFVPCAQG-VPDIFMNIMYYRDWMRQT 250
            .....:||..:.. ..|.|||||||:::|.:|||. |....|... .|.::..|.:|..|:..|
Zfish   184 FTSNMLCAADKRK-DTCDGDSGGPLLYRGIVVGITSNGGKKCGSSRKPGLYTIISHYASWIDTT 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 69/231 (30%)
cfdNP_001018368.1 Tryp_SPc 21..246 CDD:238113 69/231 (30%)

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