DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and zgc:92590

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001007055.1 Gene:zgc:92590 / 474322 ZFINID:ZDB-GENE-041024-15 Length:247 Species:Danio rerio


Alignment Length:256 Identity:76/256 - (29%)
Similarity:118/256 - (46%) Gaps:16/256 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RFLFYILVFSSLYCDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHC 69
            :.:.:.|:..::.|   :.:..|:||...:....|:|:.|....|...||.::|:|||.::|.||
Zfish     2 KMIVFALLVLAVAC---SADDKIIGGYECSPNSQPWQIYLTYDNGQRWCGASLINDRWAVSAAHC 63

  Fly    70 VKGYPTSRLQVATGTIRYA-EPGAV--YYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQA 131
            .  ...:||.|..|....| |.|..  ...:.:..|..|:.....||..|:.|.|...||...|.
Zfish    64 Y--LVANRLTVHLGEHNVAVEEGTEQRIKAEKVIPHPKYNDYTLDNDFMLIKLKEPAVFNQYVQP 126

  Fly   132 VELPTSPFPRGASELVFTGWGSQSAAGSL-PSQLQRVQQQHLNSPACESMMSAYEDLELGPCHIC 195
            |.|.||....|...|| :|||:....|.: |..||.:....|....||   .|| ..::.....|
Zfish   127 VPLTTSCSSEGEQCLV-SGWGNLINTGVVYPDVLQCLNLPVLTRAQCE---GAY-GWQITKNMFC 186

  Fly   196 A-YRQANIGACHGDSGGPLVHQGTLVGILNFFVPCA-QGVPDIFMNIMYYRDWMRQTMSGN 254
            | :.:....||.||||||::..|.|.|::::...|| .|.|.::..:..|.||:..|::.|
Zfish   187 AGFMEGGKDACQGDSGGPVICNGELRGVVSWGYGCADSGYPGVYTEVCRYTDWVASTIANN 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 72/228 (32%)
Tryp_SPc 27..246 CDD:214473 70/224 (31%)
zgc:92590NP_001007055.1 Tryp_SPc 20..240 CDD:214473 71/226 (31%)
Tryp_SPc 21..243 CDD:238113 72/228 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.