DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and CG11842

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_651662.1 Gene:CG11842 / 43431 FlyBaseID:FBgn0039629 Length:319 Species:Drosophila melanogaster


Alignment Length:288 Identity:71/288 - (24%)
Similarity:119/288 - (41%) Gaps:52/288 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ARFLFYI----LVFSSL-----YCDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGSH-------- 51
            :.|.|.|    :::.:|     |..|      |:||..|...:.|:...|     .|        
  Fly    47 SEFSFLIENAPIIYKTLDKCTSYAPL------IIGGGPAVPKEFPHAARL-----GHKDENGEVE 100

  Fly    52 -LCGGAIISDRWIITAGHCVKGYPTSRLQVA-TGTIRY------AEPGAVYYPDAIYLHCNYDSP 108
             .|||.:||||.::||.||... |...:.:| .|.:.:      |:|......| ...|..:..|
  Fly   101 WFCGGTLISDRHVLTAAHCHYS-PQGSVNIARLGDLEFDTNNDDADPEDFDVKD-FTAHPEFSYP 163

  Fly   109 KYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELVFTGWGS-QSAAGSLPSQLQRVQQQHL 172
            ...|||.::.|:..:|||.......||......|.| .:..|||. :....:...:||:|:..:.
  Fly   164 AIYNDISVVRLSRPVTFNDYKHPACLPFDDGRLGTS-FIAIGWGQLEIVPRTENKKLQKVKLYNY 227

  Fly   173 NSPACESMMSAYEDLELG---PCHICAYRQANIGACHGDSGGPLV--HQG-----TLVGILNFFV 227
            .: .|.......::|..|   ...:|.....:...|:||||||::  |..     .::||.:..|
  Fly   228 GT-RCRITADRNDELPEGYNATTQLCIGSNEHKDTCNGDSGGPVLIYHMDYPCMYHVMGITSIGV 291

  Fly   228 PC-AQGVPDIFMNIMYYRDWMRQTMSGN 254
            .| ...:|.::..:.:|.||::|.::.|
  Fly   292 ACDTPDLPAMYTRVHFYLDWIKQQLAKN 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 63/250 (25%)
Tryp_SPc 27..246 CDD:214473 61/246 (25%)
CG11842NP_651662.1 Tryp_SPc 73..315 CDD:238113 63/250 (25%)
Tryp_SPc 73..312 CDD:214473 62/247 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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