DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and Sb

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_476709.1 Gene:Sb / 41958 FlyBaseID:FBgn0003319 Length:787 Species:Drosophila melanogaster


Alignment Length:244 Identity:79/244 - (32%)
Similarity:120/244 - (49%) Gaps:28/244 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQ--TLLG---SHLCGGAIISDRWIITAGHCVKGYPTSRLQVATG--- 83
            ||||::||.|..|:|||::  :..|   :|.||||:|::.||.||||||.....|::::..|   
  Fly   544 IVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYD 608

  Fly    84 ------TIRYAEPGAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELP-TSPFPR 141
                  .:.|.|.|..    ...:|..|....|:.|:.|:.|.:.:.|......:.|| |.....
  Fly   609 FSHVQEQLPYIERGVA----KKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLI 669

  Fly   142 GASELVFTGWGSQSAAGSLPSQLQRVQQQHLNSPACESM-MSAYEDLELGPCHICA-YRQANIGA 204
            |.:..| ||||..|..|:|||.||.|....:::..|:|| |.|.....:....:|| |......:
  Fly   670 GMNATV-TGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDS 733

  Fly   205 CHGDSGGPLVHQGT-----LVGILNFFVPCAQ-GVPDIFMNIMYYRDWM 247
            |.|||||||..:..     |.||:::.:.||: .:|.:...|..:..|:
  Fly   734 CQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANLPGVCTRISKFTPWI 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 79/244 (32%)
SbNP_476709.1 Tryp_SPc 544..785 CDD:238113 79/244 (32%)

Return to query results.
Submit another query.