DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and CG32271

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_728833.1 Gene:CG32271 / 38392 FlyBaseID:FBgn0052271 Length:248 Species:Drosophila melanogaster


Alignment Length:230 Identity:72/230 - (31%)
Similarity:115/230 - (50%) Gaps:13/230 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPTSRLQVATGTIRYAEPG 91
            ||||........||.|:|: :.|:.:|||::::.:.::||.|||||...||:.|..|..|..|.|
  Fly    25 IVGGVPVDIASVPYLVNLR-IGGNFMCGGSLVTPQHVVTAAHCVKGIGASRILVVAGVTRLTETG 88

  Fly    92 AVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELV-FTGWGSQS 155
            .....|.:|....|::....:|:.:|.|...|: ......:||..:.|..|  :|: .:|||..:
  Fly    89 VRSGVDKVYTPKAYNTRTLTSDVAVLKLKAPIS-GPKVSTIELCNTSFKAG--DLIKVSGWGQIT 150

  Fly   156 AAGSLPS-QLQRVQQQHLNSPACESMMSAYEDLE--LGPCHICAYRQANIGACHGDSGGPLVHQG 217
            ......| |::.|....:...||   ||.|: |.  :.....||.......||.||||||.|:||
  Fly   151 ERNKAVSMQVRSVDVALIPRKAC---MSQYK-LRGTITNTMFCASVPGVKDACEGDSGGPAVYQG 211

  Fly   218 TLVGILNFFVPCA-QGVPDIFMNIMYYRDWMRQTM 251
            .|.||:::.|.|| :..|.::.|:...|.::.:.:
  Fly   212 QLCGIVSWGVGCARKSSPGVYTNVKTVRSFIDKAL 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 72/227 (32%)
Tryp_SPc 27..246 CDD:214473 72/223 (32%)
CG32271NP_728833.1 Tryp_SPc 24..242 CDD:214473 72/224 (32%)
Tryp_SPc 25..244 CDD:238113 72/226 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.