DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_063129516.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:230 Identity:77/230 - (33%)
Similarity:122/230 - (53%) Gaps:13/230 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHC-VKGYPTSRLQVATGTIRYAEP 90
            |.||..|.:|:.|:|.||: :.|.|.||.::|.:|:::||.|| ::......|.|:.|| |....
  Rat   189 ITGGSTAQKGEWPWQASLR-VNGKHHCGASLIGERFLLTAAHCFLRTNNPKNLTVSFGT-RVTPA 251

  Fly    91 GAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELP--TSPFPRGASELVFTGWGS 153
            ...:|.:.:.:|.:|...::.:|:.::.|.|.::|......|.||  |..||.|.. :|.|||||
  Rat   252 YMQHYVEEVIIHEDYVKGQHHDDVAIIKLTEKVSFRNDVHRVCLPEATQVFPPGEG-VVVTGWGS 315

  Fly   154 QSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLVHQGT 218
            .|..|..|..||:...:.:::.||.| ..||....:.......|.:..:.||.|||||||||..:
  Rat   316 LSYNGKSPLLLQKASIKIIDTNACNS-EEAYGGRIMDTMLCAGYMEGYVDACQGDSGGPLVHPNS 379

  Fly   219 -----LVGILNFFVPCAQ-GVPDIFMNIMYYRDWM 247
                 ||||:::...|.: ..|.::|.:..||||:
  Rat   380 RDIWYLVGIVSWGHECGRVNKPGVYMRVTSYRDWI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 77/230 (33%)
Tmprss11bXP_063129516.1 None

Return to query results.
Submit another query.