DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and LOC312273

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001101326.1 Gene:LOC312273 / 312273 RGDID:1563848 Length:246 Species:Rattus norvegicus


Alignment Length:232 Identity:78/232 - (33%)
Similarity:115/232 - (49%) Gaps:14/232 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPTSRLQVATGTIR-YAEP 90
            ||||....|...||||||..  |||:|||::|:|:|:::|.||.  :|  :|||..|... |...
  Rat    25 IVGGYTCQEHSVPYQVSLNA--GSHICGGSLITDQWVLSAAHCY--HP--QLQVRLGEHNIYEIE 83

  Fly    91 GAVYYPDA--IYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELVFTGWGS 153
            ||..:.||  :.||.:||.....|||.|:.|....|.|:....:.|| ...|...:|.:.:|||.
  Rat    84 GAEQFIDAAKMILHPDYDKWTVDNDIMLIKLKSPATLNSKVSTIPLP-QYCPTAGTECLVSGWGV 147

  Fly   154 QSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLVHQGT 218
            .......||.||.:....|:...|.   .||............:.:....:|..|||||:|..|.
  Rat   148 LKFGFESPSVLQCLDAPVLSDSVCH---KAYPRQITNNMFCLGFLEGGKDSCQYDSGGPVVCNGE 209

  Fly   219 LVGILNFFVPCA-QGVPDIFMNIMYYRDWMRQTMSGN 254
            :.||:::...|| :|.|.::..:..|.:|:.||::.|
  Rat   210 VQGIVSWGDGCALEGKPGVYTKVCNYLNWIHQTIAEN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 75/226 (33%)
Tryp_SPc 27..246 CDD:214473 74/222 (33%)
LOC312273NP_001101326.1 Tryp_SPc 25..242 CDD:238113 75/226 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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