DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and Klk10

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001004100.1 Gene:Klk10 / 292850 RGDID:1303242 Length:279 Species:Rattus norvegicus


Alignment Length:288 Identity:70/288 - (24%)
Similarity:115/288 - (39%) Gaps:63/288 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLARFLFYILVFSSLYCDLLALEHFIVGGQNAAEG-----------DAPYQVSLQTLLGSHLCG 54
            :||.:.|..:|:.     .|.|.:..::.|....|.           ..|:||||...| ...|.
  Rat    15 LSLVKLLLPLLMM-----QLWAAQALLLPGNTTREDLEAFGTLCPSVSQPWQVSLFHNL-QFQCA 73

  Fly    55 GAIISDRWIITAGHCVKGYPTSRLQVATGTIRYAEPGAVYYPDAIYLHCNYDSPKYQ-------- 111
            |.::...|::||.||.:..|. |.:|....:...:...:...::...|     ||||        
  Rat    74 GVLVDQNWVLTAAHCWRNKPL-RARVGDDHLLLFQSEQLRSTNSPVFH-----PKYQPCSGPVLP 132

  Fly   112 -----NDIGLLHLNESITFNALTQAVELP-TSPFPRGASELVFTGWGSQSAAGSLPSQLQRVQQQ 170
                 :|:.:|.|:..:...:....|:|| ....||  .|...:|||:.:.        :||:..
  Rat   133 LRSDEHDLMMLKLSSPVVLTSKVHPVQLPFQCAQPR--QECQVSGWGTTAN--------RRVKYN 187

  Fly   171 H---------LNSPACESMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLVHQGTLVGILNFF 226
            .         |:...||:.........:    |||....:..:|..|||||||...||.|||::.
  Rat   188 RSLSCSRVTLLSQKQCETFYPGVITNNM----ICAGMDRDQDSCQSDSGGPLVCDNTLHGILSWS 248

  Fly   227 V-PC--AQGVPDIFMNIMYYRDWMRQTM 251
            : ||  |...|.::..|..|.:|:|:.:
  Rat   249 IYPCGAATQYPAVYAKICNYTNWIRRVI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 64/259 (25%)
Tryp_SPc 27..246 CDD:214473 62/255 (24%)
Klk10NP_001004100.1 Tryp_SPc 50..272 CDD:214473 60/242 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.