DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and Prss54

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:XP_038953481.1 Gene:Prss54 / 291846 RGDID:1307877 Length:384 Species:Rattus norvegicus


Alignment Length:274 Identity:63/274 - (22%)
Similarity:107/274 - (39%) Gaps:75/274 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LLALEH---FIVGGQNA-----------AEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCV 70
            ||.:.|   .|.|.|.|           :..:.|:.||:|....:||..|.|:|:.||::.    
  Rat    11 LLYMSHSSSAICGIQKANIVDQLHENLVSSTEFPWVVSIQDKQYTHLAFGCILSEFWILST---- 71

  Fly    71 KGYPTSRLQ-----VATGTIRYAEPGAV----YYPDAIYLHCNYDSPKYQNDIGLLHLNESITFN 126
                .|.||     :|...|...:|...    |..:||..|.|:::...:|:|.||..:.:|.|:
  Rat    72 ----ASALQNRKEVIAVVGIANMDPRNADHKEYSINAIIPHENFNNNSMRNNIALLRTDSAIHFD 132

  Fly   127 ALTQ-------AVELPTSPFPRGASELVFTGWGSQSAAGS----LPSQLQRVQQQHLNSPACESM 180
            .|.|       ::..||:     .......||...||..:    ..|.|:|:             
  Rat   133 DLVQPICFLGKSLHKPTA-----LKNCWVAGWNPTSAVNTGNHMTMSILRRI------------- 179

  Fly   181 MSAYEDLELGPCH-----ICA-YRQANIGACHGDSGGPLVHQ------GTLVGILNFFVPCAQGV 233
              :..|:|:.|.|     .|| :...:...|.|:.|.|::.|      ..|.|:|.:......|:
  Rat   180 --SVNDIEVCPLHRQQKTECASHTNKDSNVCLGEPGNPMMCQVKKLDLWILRGLLAYGSDLCPGL 242

  Fly   234 PDIFMNIMYYRDWM 247
            . ::.::..|.:|:
  Rat   243 L-LYTSVDDYSNWI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 60/264 (23%)
Prss54XP_038953481.1 Tryp_SPc 42..255 CDD:473915 55/241 (23%)

Return to query results.
Submit another query.