DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and LOC286960

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_775423.1 Gene:LOC286960 / 286960 RGDID:708585 Length:247 Species:Rattus norvegicus


Alignment Length:233 Identity:77/233 - (33%)
Similarity:117/233 - (50%) Gaps:14/233 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPTSRLQVATG--TIRYAE 89
            ||||....:...||||||...: ||.|||::|||:|:::|.||.|    .:|||..|  .|...|
  Rat    24 IVGGYTCPKHLVPYQVSLHDGI-SHQCGGSLISDQWVLSAAHCYK----RKLQVRLGEHNIHVLE 83

  Fly    90 PGAVYY-PDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELVFTGWGS 153
            .|..:. .:.|..|..|:.....|||.|:.|......|:....|.||.|.....|..|| :|||:
  Rat    84 GGEQFIDAEKIIRHPEYNKDTLDNDIMLIKLKSPAVLNSQVSTVSLPRSCASTDAQCLV-SGWGN 147

  Fly   154 Q-SAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLVHQG 217
            . |..|..|:.||.::...|::.:|:   .:|............:.:....:|.||||||:|..|
  Rat   148 TVSIGGKYPALLQCLEAPVLSASSCK---KSYPGQITSNMFCLGFLEGGKDSCDGDSGGPVVCNG 209

  Fly   218 TLVGILNFFVPCA-QGVPDIFMNIMYYRDWMRQTMSGN 254
            .:.||:::...|| :|.|.::..:..|..|:::||:.|
  Rat   210 EIQGIVSWGSVCAMRGKPGVYTKVCNYLSWIQETMANN 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 74/227 (33%)
Tryp_SPc 27..246 CDD:214473 73/223 (33%)
LOC286960NP_775423.1 Tryp_SPc 23..240 CDD:214473 73/224 (33%)
Tryp_SPc 24..243 CDD:238113 74/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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