DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and CG30323

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_725729.2 Gene:CG30323 / 246539 FlyBaseID:FBgn0050323 Length:306 Species:Drosophila melanogaster


Alignment Length:316 Identity:66/316 - (20%)
Similarity:106/316 - (33%) Gaps:106/316 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RFLFYILVFSSLYC---------DLLALEHFIVGGQNAAEGDAPYQVSLQTLL------GSHLCG 54
            :||..:|:.||.|.         :|...:::   .||.        ||::|..      .:|.|.
  Fly     2 QFLLLLLLTSSAYSNEGKKGLQRNLYVTDNY---HQNV--------VSIRTRKHIRHWGDNHFCA 55

  Fly    55 GAIISDRWIITAGHCVKGYPTS---------RLQVATGT---IRYAEPGAVYYPDAIYLH----- 102
            |:::|..|::|:|.||...|.|         .|:|...|   ::...|..:|:...|.|.     
  Fly    56 GSLLSAWWVVTSGCCVSTRPESTPNQPSNRKNLRVVVFTPKRLKKPSPKNIYHVQKIVLDESAIS 120

  Fly   103 -CNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGASELVFT------GWG-------- 152
             |        .::.||.|:..:|....  |:.||       ..||..|      |||        
  Fly   121 GC--------TELALLKLDRGVTGQRF--AMMLP-------EKELNSTWLCNSLGWGRIYYVSYV 168

  Fly   153 -----------------SQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICAYRQA 200
                             :....|...|:|.:::.|.::...|:.           .|..|....:
  Fly   169 YISAMCPAFSMVYDNPVTWFQDGPYSSELIQIRAQKISEYECKP-----------DCSRCLCMTS 222

  Fly   201 NIG---ACHGDSGGPLVHQGTLVGILNFFVPCAQGVPDIFMNIMYYRDWMRQTMSG 253
            ..|   .|..|.|.||.....|.|:......|.......:.||...|.::..|:||
  Fly   223 YTGRGNMCQQDLGSPLFCDHFLYGVARRVHTCDDEGFMFYTNIYQNRKFIEDTLSG 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 56/280 (20%)
Tryp_SPc 27..246 CDD:214473 56/276 (20%)
CG30323NP_725729.2 Tryp_SPc 45..275 CDD:304450 51/257 (20%)
Tryp_SPc 45..272 CDD:214473 51/254 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.