DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and svh-1

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:243 Identity:64/243 - (26%)
Similarity:102/243 - (41%) Gaps:23/243 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQT-LLGSHLCGGAIISDRWIITAGHCV-KGYPTSRLQVATGTIRYAE 89
            :|||.....|..|:..:|:. ...:|.||.:|:....:|||.||. :....|..:|..|.....:
 Worm   713 VVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQ 777

  Fly    90 PGA---VYYPDAIYLHCNYDSPKYQNDIGLLHL-NESITFNALTQAVELPTSPF---PRGASELV 147
            ...   ::|...|:.:..| ...:.:||.:|.: ...|.||...|.:.||:..|   |  ..:.|
 Worm   778 TDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTP--GRQCV 839

  Fly   148 FTGWGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICA-YRQANIGACHGDSGG 211
            .:||||...  ....:||......:|...|.:....|..:....  .|| |.:..|.:|.|||||
 Worm   840 VSGWGSMGL--RYAERLQAALIPIINRFDCVNSSQIYSSMSRSA--FCAGYLEGGIDSCQGDSGG 900

  Fly   212 PLV---HQG--TLVGILNFFVPCAQ-GVPDIFMNIMYYRDWMRQTMSG 253
            |..   ..|  .|.|::::...||| ..|.|:..:..|..|:...::|
 Worm   901 PFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIING 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 63/238 (26%)
Tryp_SPc 27..246 CDD:214473 62/234 (26%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 63/238 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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