DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17477 and CG43110

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001246396.1 Gene:CG43110 / 12798330 FlyBaseID:FBgn0262570 Length:483 Species:Drosophila melanogaster


Alignment Length:273 Identity:76/273 - (27%)
Similarity:108/273 - (39%) Gaps:52/273 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FLFYILVFSSLYCDLLALEHF------------IVGGQNAAEGDAPYQVSLQTLLGSH-LCGGAI 57
            :||..:...||....||...|            |:.|.||::..|.|...:...  :| ||||.|
  Fly     3 YLFVWIFLCSLGSCQLAYSMFLKQPCGKTPVPKIISGSNASQQSAQYMAGIFNT--THLLCGGTI 65

  Fly    58 ISDRWIITAGHCVKGYPTSRLQVATGTIRYAEPGAVYYPDAIYL-----HCNYDSPKYQNDIGLL 117
            |.:.:::|..||..   |..|.|..|......|     .|.|.:     |..|.:..|.|||.|:
  Fly    66 IHEDFVLTVAHCKS---TQTLFVRLGAYNINHP-----TDQIRVIETIAHPQYSNSTYANDIALV 122

  Fly   118 HLNESITFNALTQ--AVELPTSPFPRGASELVFT--GWG-SQSAAGSLPSQLQRVQQQHLNSPAC 177
            .|..|:.||...|  .:.|..:   .|.....:.  ||| :::|..|  ..|||:.....|...|
  Fly   123 KLERSVIFNLNIQPICIHLDAT---LGKQIRYYNAFGWGRTRNAEQS--DILQRIFVNRTNPMIC 182

  Fly   178 ESMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLV----HQG----TLVGILNFFVPCAQGVP 234
            ...:....|    |..|||..... ..|.|||||||:    :||    |..||.::......|| 
  Fly   183 HLYLGMSPD----PKQICATTDQG-DTCAGDSGGPLISKITYQGKNFDTQFGITSYGTRECNGV- 241

  Fly   235 DIFMNIMYYRDWM 247
            .::.::..|..|:
  Fly   242 GLYTDVSQYSGWI 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 69/240 (29%)
CG43110NP_001246396.1 Tryp_SPc 36..257 CDD:238113 69/240 (29%)

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