DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and CG43125

DIOPT Version :9

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001247344.1 Gene:CG43125 / 12798281 FlyBaseID:FBgn0262588 Length:258 Species:Drosophila melanogaster


Alignment Length:274 Identity:61/274 - (22%)
Similarity:115/274 - (41%) Gaps:76/274 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFYILVF---SSLYCDLLALEHFIVGGQNAAEGDAPYQVSLQTLLGSHL-CGGAIISDRWIITAG 67
            :|.:|:|   |:|:.:...       |:::....||:.|.::..|.|:: |.|.:|::|:::||.
  Fly     9 VFALLLFYQGSALFLEQNC-------GKSSVFSPAPWLVKIRPELSSNITCTGTLINERFVLTAA 66

  Fly    68 HCVKGYPTS---RLQVATGT------IRYAEPGAVYYPDAIYLHCNYDSPKYQNDIGLLHLNESI 123
            .|: .|.|.   ||....||      ::|.|   :|...|: :|.:|.|..:|.:|.||.|..|:
  Fly    67 SCI-DYQTELIVRLGEIDGTLQNSSKLQYEE---IYVARAL-IHRSYSSESHQYNIALLRLKTSV 126

  Fly   124 TFNALTQAV----------ELPTSPFPRGASELVFTGWGSQSAAGSLPSQLQRVQQQHLNSPACE 178
            .:....|.:          :.||....:..:|     ...::.||        :.::.||     
  Fly   127 VYKKNIQPICIDVNVGKVPKAPTFEIEKKKNE-----EPKKNKAG--------IMKRFLN----- 173

  Fly   179 SMMSAY------EDLELGPCHICA----YRQANIGACHGDSGGPLVHQGTLVGILNFFVPCAQGV 233
            ..:|.:      .|:.|.|..|..    .:|.|..|        |.||..::...|     ::..
  Fly   174 WFLSLFGVREPRPDVILPPQPIAVGWPLTKQINESA--------LFHQYGILSHRN-----SESK 225

  Fly   234 PDIFMNIMYYRDWM 247
            .|::.::|.|.:|:
  Fly   226 KDVYTDVMAYVNWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 56/251 (22%)
Tryp_SPc 27..246 CDD:214473 55/248 (22%)
CG43125NP_001247344.1 Tryp_SPc 37..>137 CDD:304450 31/104 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.