DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and F11

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_082342.1 Gene:F11 / 109821 MGIID:99481 Length:624 Species:Mus musculus


Alignment Length:233 Identity:76/233 - (32%)
Similarity:121/233 - (51%) Gaps:17/233 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 IVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDRWIITAGHCVKGYPT-SRLQVATGTIRYAE- 89
            :|||..:..|:.|:||:|....| |||||:||.::||:||.||..|..| .:|:|..|.:..:| 
Mouse   390 VVGGAASVHGEWPWQVTLHISQG-HLCGGSIIGNQWILTAAHCFSGIETPKKLRVYGGIVNQSEI 453

  Fly    90 -PGAVYY-PDAIYLHCNYDSPKYQNDIGLLHLNESITFNALTQAVELPTSPFPRGA--SELVFTG 150
             .|..:: ...:.:|..|.:.:...||.||.|..::.:....:.:.|| |...|.|  :|...||
Mouse   454 NEGTAFFRVQEMIIHDQYTTAESGYDIALLKLESAMNYTDFQRPICLP-SKGDRNAVHTECWVTG 517

  Fly   151 WGSQSAAGSLPSQLQRVQQQHLNSPACESMMSAYEDLELGPCHICA-YRQANIGACHGDSGGPL- 213
            ||..:..|.:.|.||:.:...:::..|:   :.|...::....||| |::.....|.||||||| 
Mouse   518 WGYTALRGEVQSTLQKAKVPLVSNEECQ---TRYRRHKITNKMICAGYKEGGKDTCKGDSGGPLS 579

  Fly   214 -VHQGT--LVGILNFFVPCAQGV-PDIFMNIMYYRDWM 247
             .:.|.  ||||.::...|.|.. |.::.|:..|.||:
Mouse   580 CKYNGVWHLVGITSWGEGCGQKERPGVYTNVAKYVDWI 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 76/233 (33%)
F11NP_082342.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..376 CDD:128519
Tryp_SPc 390..617 CDD:238113 75/231 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.