DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17477 and Ctrl

DIOPT Version :10

Sequence 1:NP_650598.1 Gene:CG17477 / 42067 FlyBaseID:FBgn0038479 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_075671.1 Gene:Ctrl / 109660 MGIID:88558 Length:264 Species:Mus musculus


Alignment Length:278 Identity:86/278 - (30%)
Similarity:125/278 - (44%) Gaps:43/278 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LARFLFYILVFSSLYCDL------LALEHFIVGGQNAAEGDAPYQVSLQTLLGSHLCGGAIISDR 61
            |:..|..:|:.||..|.:      |:....||.|:||..|..|:|||||...|.|.|||::||..
Mouse     4 LSLTLSLVLLGSSWGCGVPAITPALSYNQRIVNGENAVPGSWPWQVSLQDNTGFHFCGGSLISPN 68

  Fly    62 WIITAGHCVKGYPTSRLQVATGTIRY------------AEPGAVYYPDAIYLHCNYDSPKYQNDI 114
            |::||.||         ||..|  |:            |||..|........|.|:::....||:
Mouse    69 WVVTAAHC---------QVTPG--RHFVVLGEYDRSSNAEPVQVLSIARAITHPNWNANTMNNDL 122

  Fly   115 GLLHLNESITFNALTQAVELPTS--PFPRGASELVFTGWGSQSAAGSL-PSQLQRVQQQHLNSPA 176
            .||.|.....:.|....|.|.::  ..|.|.: .|.||||..|..|:: |::||:|....:....
Mouse   123 TLLKLASPARYTAQVSPVCLASTNEALPSGLT-CVTTGWGRISGVGNVTPARLQQVVLPLVTVNQ 186

  Fly   177 CESMMSAYEDLELGPCHICAYRQANIGACHGDSGGPLVHQ----GTLVGILNFFVP-CAQGVPDI 236
            |..    |....:....||| ..:...:|.||||||||.|    ..|:||:::... |....|.:
Mouse   187 CRQ----YWGARITDAMICA-GGSGASSCQGDSGGPLVCQKGNTWVLIGIVSWGTKNCNIQAPAM 246

  Fly   237 FMNIMYYRDWMRQTMSGN 254
            :..:..:..|:.|.|:.|
Mouse   247 YTRVSKFSTWINQVMAYN 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17477NP_650598.1 Tryp_SPc 27..250 CDD:238113 76/242 (31%)
CtrlNP_075671.1 Tryp_SPc 34..260 CDD:238113 76/242 (31%)

Return to query results.
Submit another query.