DRSC/TRiP Functional Genomics Resources

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Protein Alignment cher and ACTN2

DIOPT Version :10

Sequence 1:NP_001262659.2 Gene:cher / 42066 FlyBaseID:FBgn0014141 Length:2577 Species:Drosophila melanogaster
Sequence 2:NP_001094.1 Gene:ACTN2 / 88 HGNCID:164 Length:894 Species:Homo sapiens


Alignment Length:254 Identity:88/254 - (34%)
Similarity:144/254 - (56%) Gaps:22/254 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 QYEENFDED------MEAERDLAEDAQWKKIQQNTFTRWANEHLKTIDRSINNLETDLSDGLRLI 223
            ||...:|||      .|.:|||..|..|:|.|:.|||.|.|.||:.....|.|:|.|..:||:|:
Human     9 QYNYVYDEDEYMIQEEEWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFRNGLKLM 73

  Fly   224 ALIEVLSQKRMPKYNKRPTFRSQKLENVSVALKFLQDEGIKIVNIDSSDIVDCKLKLILGLIWTL 288
            .|:||:|.:|:||.: |...|..|:.||:.||.::..:|:|:|:|.:.:|||..:|:.||:|||:
Human    74 LLLEVISGERLPKPD-RGKMRFHKIANVNKALDYIASKGVKLVSIGAEEIVDGNVKMTLGMIWTI 137

  Fly   289 ILHYSISMPMWDGEDDKQLNGSGHTPKQRLLNWIHAKIP---DLPINNFTNDWTTGKAVGALVDA 350
            ||.::|          :.::....:.|:.||.|...|..   ::.|.||...|..|..:.||:..
Human   138 ILRFAI----------QDISVEETSAKEGLLLWCQRKTAPYRNVNIQNFHTSWKDGLGLCALIHR 192

  Fly   351 CAPGLCPDWELWDPKDAVQNASEAMGLADDWLNVRQLIKPEELVN-PNVDEQSMMTYLS 408
            ..|.|. |:...:..|.:.|.:.||.:|:..|::.:::..|::|| |..||:::|||:|
Human   193 HRPDLI-DYSKLNKDDPIGNINLAMEIAEKHLDIPKMLDAEDIVNTPKPDERAIMTYVS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cherNP_001262659.2 CH_dFLNA-like_rpt1 175..297 CDD:409160 52/121 (43%)
CH_dFLNA-like_rpt2 298..415 CDD:409164 31/115 (27%)
IG_FLMN 432..527 CDD:214720
IG_FLMN 532..627 CDD:214720
IG_FLMN 631..724 CDD:214720
IG_FLMN 728..815 CDD:214720
IG_FLMN 821..913 CDD:214720
IG_FLMN 918..1001 CDD:214720
Filamin 1012..1098 CDD:395505
IG_FLMN 1109..1196 CDD:214720
Filamin 1197..1293 CDD:395505
IG_FLMN 1302..1392 CDD:214720
IG_FLMN 1395..1490 CDD:214720
IG_FLMN 1494..1587 CDD:214720
IG_FLMN 1606..1682 CDD:214720
IG_FLMN <1731..1791 CDD:214720
IG_FLMN 1797..1884 CDD:214720
IG_FLMN 1978..2067 CDD:214720
Filamin <2111..2159 CDD:395505
IG_FLMN 2172..2260 CDD:214720
IG_FLMN 2265..2354 CDD:214720
IG_FLMN 2360..2448 CDD:214720
IG_FLMN 2488..2577 CDD:214720
ACTN2NP_001094.1 Actin-binding 1..254 88/254 (35%)
CH_ACTN_rpt1 35..139 CDD:409063 44/104 (42%)
CH_ACTN_rpt2 143..257 CDD:409065 32/119 (27%)
Spectrin 1 281..391
Spectrin 281..391 CDD:395348
Spectrin 2 401..506
SPEC 402..629 CDD:238103
Spectrin 3 516..627
Spectrin 4 637..740
Spectrin 637..739 CDD:395348
PTZ00184 747..>851 CDD:185504
EFhand_Ca_insen 824..890 CDD:430177
Blue background indicates that the domain is not in the aligned region.

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