DRSC/TRiP Functional Genomics Resources

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Protein Alignment cher and plecb

DIOPT Version :10

Sequence 1:NP_001262659.2 Gene:cher / 42066 FlyBaseID:FBgn0014141 Length:2577 Species:Drosophila melanogaster
Sequence 2:XP_021322489.2 Gene:plecb / 100321011 ZFINID:ZDB-GENE-100917-2 Length:5908 Species:Danio rerio


Alignment Length:300 Identity:97/300 - (32%)
Similarity:156/300 - (52%) Gaps:49/300 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 EGQQA-------DQYEENFDEDMEAERDLAEDAQWKKIQQNTFTRWANEHL-----KTIDRSINN 211
            ||::.       :..|:.|...:|.|||        ::|:.|||:|.|:||     ....|.:|:
Zfish  1391 EGEETFWDHSLQEPEEKTFPNFVEDERD--------RVQKKTFTKWVNKHLIKHWRSETQRHVND 1447

  Fly   212 LETDLSDGLRLIALIEVLSQKRMPKY----------NKRPTFRSQKLENVSVALKFLQDEGIKIV 266
            |..||.||..||:|:||||.:.:|:.          .:|...|..||:||.:||.||:...:|:|
Zfish  1448 LYEDLRDGHNLISLLEVLSGETLPRERDVVRSVRLPRERGRMRFHKLQNVQIALDFLRHRQVKLV 1512

  Fly   267 NIDSSDIVDCKLKLILGLIWTLILHYSISMPMWDGEDDKQLNGSGH--TPKQRLLNWIHAKIP-- 327
            ||.:.||.|...||.||||||:|||:.:|..:    .|.|:||...  :.|::||.|....:.  
Zfish  1513 NIRNDDIADGNPKLTLGLIWTIILHFQVSYSI----SDIQVNGQSDDMSAKEKLLFWSQRMVDGY 1573

  Fly   328 -DLPINNFTNDWTTGKAVGALVDACAPGLCPDWELWDPKDAVQNASEAMGLADDWLNVRQLIKPE 391
             .:..:|||..|..||...|::....|.|....:::...: ::|..:|..:|:..|.|.:|:.||
Zfish  1574 HGIRCDNFTTSWRDGKLFNAIIHKHEPRLIDMPKVYRQTN-MENLEQAFTVAEKELGVTRLLDPE 1637

  Fly   392 ELVNPNVDEQSMMTYLSQYPNS-----KLKTGAPLRPKTN 426
            ::..|:.||:|::||:|...::     .::.||    |||
Zfish  1638 DVDVPHPDEKSIITYVSSLYDAMPRVPDVQDGA----KTN 1673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cherNP_001262659.2 CH_dFLNA-like_rpt1 175..297 CDD:409160 56/136 (41%)
CH_dFLNA-like_rpt2 298..415 CDD:409164 32/126 (25%)
IG_FLMN 432..527 CDD:214720
IG_FLMN 532..627 CDD:214720
IG_FLMN 631..724 CDD:214720
IG_FLMN 728..815 CDD:214720
IG_FLMN 821..913 CDD:214720
IG_FLMN 918..1001 CDD:214720
Filamin 1012..1098 CDD:395505
IG_FLMN 1109..1196 CDD:214720
Filamin 1197..1293 CDD:395505
IG_FLMN 1302..1392 CDD:214720
IG_FLMN 1395..1490 CDD:214720
IG_FLMN 1494..1587 CDD:214720
IG_FLMN 1606..1682 CDD:214720
IG_FLMN <1731..1791 CDD:214720
IG_FLMN 1797..1884 CDD:214720
IG_FLMN 1978..2067 CDD:214720
Filamin <2111..2159 CDD:395505
IG_FLMN 2172..2260 CDD:214720
IG_FLMN 2265..2354 CDD:214720
IG_FLMN 2360..2448 CDD:214720
IG_FLMN 2488..2577 CDD:214720
plecbXP_021322489.2 None
Blue background indicates that the domain is not in the aligned region.

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