DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GckIII and Tao

DIOPT Version :9

Sequence 1:NP_650596.1 Gene:GckIII / 42064 FlyBaseID:FBgn0266465 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001188672.1 Gene:Tao / 32948 FlyBaseID:FBgn0031030 Length:1039 Species:Drosophila melanogaster


Alignment Length:612 Identity:193/612 - (31%)
Similarity:267/612 - (43%) Gaps:147/612 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVDPELIFTKQERIGKGSFGEVFKGIDNRTQQVVAIKIIDL--EEAEDEIDDIQQEIMVLSQCDS 68
            |.|||.||.....||.||||.|:....|.|:::||||.:..  ::::::..||.:||..|.|.:.
  Fly    20 KHDPEKIFEDLREIGHGSFGAVYYARCNLTREIVAIKKMSYTGKQSQEKWQDILKEIRFLRQLNH 84

  Fly    69 PYVTKYYGSFLKGTKLWIIMEYLGGGSALDLMKAGS--FEEMHIGIILREVLKGLDYLHSERKLH 131
            |...:|.|.:|:.:..|::|||. .|||.|:::...  ..|..|..|...||.||.||||..::|
  Fly    85 PNTIEYKGCYLRESTAWLVMEYC-VGSASDIIEVHKKPLHEDEIAAICLGVLSGLSYLHSLGRIH 148

  Fly   132 RDIKAANVLLSEQGDVKLADFGVAGQLTNTTSKRNTFVGTPFWMAPEVI---KQSQYDAKADIWS 193
            |||||.|:||::.|.|||||||.|.    .....|:|||||:|||||||   .:.|||.|.|:||
  Fly   149 RDIKAGNILLTDNGVVKLADFGSAA----IKCPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWS 209

  Fly   194 LGITAIELAKGEPPNSELHPMRVLFLIPKNNPPQL-TGSYTKSFKDFVEACLNKDPENRPTAKEL 257
            ||||.||||:.:||...::.|..|:.|.:|..|.| ...::.:|..|||.||.|.|..||::.:|
  Fly   210 LGITCIELAERKPPYFNMNAMSALYHIAQNESPTLPKNDWSDAFCSFVELCLKKMPAERPSSAKL 274

  Fly   258 LKYPFIKKAKKNAYLIDLIDRFKK-------------WKVSKGDESETESENSDSD--SDAKQGG 307
            |.:.::.:.:.:..|::||.|.|.             .|:...|..||||...|:|  .|...||
  Fly   275 LTHAYVTRPRSDTVLLELIARTKSAVRELDNLNYRKMKKILMVDTCETESAVGDTDDQQDDHAGG 339

  Fly   308 SSQDEPWIMTVKGLHINSAPRAGVNSFQLQEHELTMQKLMQTTHSPAGGGGVQASPAANALSSSV 372
            .|.        |...|.|            ||.:         ||.    ||.   ||::.|||.
  Fly   340 DSS--------KSNSITS------------EHSI---------HSV----GVS---AASSQSSSS 368

  Fly   373 SAVAASASSVSVITANEGVSSASALPPQNSHVHNHNHNNINNNNIRNLSNKHATTTMLNAAPPPS 437
            :::.|:|.:...|.|:....:|||......|.|:|.|..                      ||||
  Fly   369 NSIPAAAQNHHHIAAHHHQQAASAAVAAAMHHHHHPHQQ----------------------PPPS 411

  Fly   438 SVTSSSSASELQQKRSSSKPELRQSRSAAPLDQVEDRRASLGLPLQSSVPTPSTAEQQQQRRSSQ 502
            ..:.                                         |...|.|..|       .|:
  Fly   412 WPSG-----------------------------------------QQGQPVPPGA-------VSR 428

  Fly   503 RESFHANNAALVASCSSSSNNHSHEEHVATNHASHVKHSGAGQRLVQTNSACLNNFLFPVLSDIQ 567
            ..|.|.|...|.....|.:||.:     .||.||.|........|....|      :.|.||.: 
  Fly   429 NSSRHRNRPPLPNIMHSMNNNVT-----PTNSASVVPAPAPAPVLPPPIS------VLPHLSAM- 481

  Fly   568 RKYSGGGSAGSGGSGGRNIGVGSDIGD 594
             .:.|||..|:|||||.:...|..:.|
  Fly   482 -GHVGGGGTGTGGSGGGSPASGGPLAD 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GckIIINP_650596.1 STKc_MST3_like 12..283 CDD:270786 115/291 (40%)
S_TKc 13..263 CDD:214567 109/257 (42%)
TaoNP_001188672.1 STKc_TAO 25..282 CDD:270784 110/261 (42%)
S_TKc 27..280 CDD:214567 109/257 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438551
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.