DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpS11 and AT2G36160

DIOPT Version :9

Sequence 1:NP_524382.1 Gene:mRpS11 / 42061 FlyBaseID:FBgn0038474 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_181158.1 Gene:AT2G36160 / 818188 AraportID:AT2G36160 Length:150 Species:Arabidopsis thaliana


Alignment Length:153 Identity:43/153 - (28%)
Similarity:62/153 - (40%) Gaps:24/153 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 EKTVDIDTLINRKAKFFPDASTANTLFNGIPFNELPICNIRVSPNNTIISVTDHKGVLRLIRSCG 119
            |..||:.||       .|.......:|.        :.:|..|.|:|.|.|||..|...|:|..|
plant     8 EPKVDVVTL-------GPSVREGEQVFG--------VVHIFASFNDTFIHVTDLSGRETLVRITG 57

  Fly   120 IEGFKNTR-KGTNIAAQATAVTISGKAIELGWKTVRVKVRGL--------GPGRMSAIKGLQMGG 175
            ....|..| :.:..||...|..::.:..|||...:.||:|..        |||..||::.|...|
plant    58 GMKVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSG 122

  Fly   176 LNIVSITDNTHVSFNPPRPRKQR 198
            :.|..|.|.|.:..:..|.:..|
plant   123 MKIGRIEDVTPIPTDSTRRKGGR 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS11NP_524382.1 Ribosomal_S11 91..198 CDD:294237 35/115 (30%)
AT2G36160NP_181158.1 PTZ00129 1..139 CDD:185465 41/145 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0100
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100266
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

Return to query results.
Submit another query.