DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS11 and rps1402

DIOPT Version :10

Sequence 1:NP_524382.1 Gene:mRpS11 / 42061 FlyBaseID:FBgn0038474 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_595737.1 Gene:rps1402 / 5802781 PomBaseID:SPBC18H10.13 Length:139 Species:Schizosaccharomyces pombe


Alignment Length:117 Identity:31/117 - (26%)
Similarity:52/117 - (44%) Gaps:9/117 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTR-KGTNIAAQATAVTISGKAIELGWKTVR 154
            :.:|..|.|:|.:.:||..|...::|..|....|..| :.:..||...|...:.|..|:|...:.
pombe    18 VAHIFASFNDTFVHITDLTGKETIVRVTGGMKVKTDRDESSPYAAMLAAQDAAAKCKEVGITALH 82

  Fly   155 VKVRGL--------GPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
            :|:|..        |||..:|::.|...|:.|..|.|.|.:..:..|.:..|
pombe    83 IKIRATGGTATKTPGPGAQAALRALARAGMRIGRIEDVTPIPTDSTRRKGGR 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS11NP_524382.1 RpsK 91..198 CDD:439870 30/115 (26%)
rps1402NP_595737.1 Ribosomal_S11 2..128 CDD:444843 29/109 (27%)

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