DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS11 and RpS14a

DIOPT Version :10

Sequence 1:NP_524382.1 Gene:mRpS11 / 42061 FlyBaseID:FBgn0038474 Length:200 Species:Drosophila melanogaster
Sequence 2:NP_524884.1 Gene:RpS14a / 47218 FlyBaseID:FBgn0004403 Length:151 Species:Drosophila melanogaster


Alignment Length:117 Identity:32/117 - (27%)
Similarity:50/117 - (42%) Gaps:9/117 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 ICNIRVSPNNTIISVTDHKGVLRLIRSCGIEGFKNTR-KGTNIAAQATAVTISGKAIELGWKTVR 154
            :.:|..|.|:|.:.|||..|...:.|..|....|..| :.:..||...|..::.|...||...:.
  Fly    30 VAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALH 94

  Fly   155 VKVRGL--------GPGRMSAIKGLQMGGLNIVSITDNTHVSFNPPRPRKQR 198
            :|:|..        |||..||::.|....:.|..|.|.|.:..:..|.:..|
  Fly    95 IKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDSTRRKGGR 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS11NP_524382.1 RpsK 91..198 CDD:439870 31/115 (27%)
RpS14aNP_524884.1 PTZ00129 1..140 CDD:185465 30/109 (28%)

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