DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dad and smad3a

DIOPT Version :10

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_571646.1 Gene:smad3a / 58092 ZFINID:ZDB-GENE-000509-3 Length:425 Species:Danio rerio


Alignment Length:392 Identity:108/392 - (27%)
Similarity:161/392 - (41%) Gaps:88/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 AVKSRLDPPTKT-QRDVVEPTTTTAPTYLQCILIPCKTQTVWE-------PHVTASRLFFWRELW 295
            ||||.:....|| |.|.:|...||.....:||.||.......:       |||...||:.|.:|.
Zfish    33 AVKSLVKKLKKTGQLDELEKAITTQDVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLQ 97

  Fly   296 NAKELKRLPTCPAA----RDCIYMCCNPLHWFR--------ILHQPETESPT--PP---YQRSKM 343
            :..||:.:..|..|    :|  .:|.||.|:.|        :|....||.|:  ||   |..|  
Zfish    98 SHHELRAIELCEFAFHMKKD--EVCVNPYHYQRVETPVLPPVLVPRHTEIPSEFPPLDDYSHS-- 158

  Fly   344 LRLKDADFEEDSQNDAKSAALSTWSAESTSISNIYKPALYESVTTDGKDHNINSQV--------- 399
                   ..|::...|.....|.:..|:       .|..|.|...:..||.:|..:         
Zfish   159 -------IPENTIFPAGIEPQSNYIPET-------PPPGYISEDGETSDHQMNRSMDTGSPNLSP 209

  Fly   400 ----------------------WCQIAYWEMAHRVGEFFHAKTNAVNI--YTDGIVASEVDSMCL 440
                                  ||.|:|:|:..||||.|||...::.:  :||   .|..:..||
Zfish   210 NPVSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSLTVDGFTD---PSNSERFCL 271

  Fly   441 RDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVWIYNRGNTTIFVDSPTLSENLD----RVCKV 501
            ..|:....  ::.|...|..:|.||.|....|:|:.....::.|||.||..::...    .|||:
Zfish   272 GLLSNVNR--NAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKI 334

  Fly   502 MPGYCLKAFETNR-AELLSMR-DHGHHPMGPVDYF-SIKISFGKGWGRDYKRQDIMGCPCWLEVH 563
            .||..||.|.... |.||:.. :.|...:..:... :|::||.||||.:|:||.:...|||:|:|
Zfish   335 PPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELH 399

  Fly   564 FS 565
            .:
Zfish   400 LN 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 33/109 (30%)
MH2_I-SMAD 400..565 CDD:199821 58/173 (34%)
smad3aNP_571646.1 MH1_SMAD_2_3 7..131 CDD:199815 32/99 (32%)
MH2_SMAD_2_3 224..414 CDD:199826 58/183 (32%)

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