DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dad and Smad9

DIOPT Version :9

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_036019060.1 Gene:Smad9 / 55994 MGIID:1859993 Length:456 Species:Mus musculus


Alignment Length:431 Identity:109/431 - (25%)
Similarity:173/431 - (40%) Gaps:115/431 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 EALMKQLKRKQRNELLLAVKSRLDPPTKTQRDVVEPTTTTAPTYLQCILIPCKTQTVWE------ 280
            ::|:|:||:|                 |...|.:|...:......:|:.||.......:      
Mouse    65 DSLVKKLKKK-----------------KGAMDELERALSCPGQPSKCVTIPRSLDGRLQVSHRKG 112

  Fly   281 -PHVTASRLFFWRELWNAKELKRLPTC--PAARDCIYMCCNPLHWFRILHQPETESPT-PPY--- 338
             |||...|::.|.:|.:..|||.|..|  |.......:|.||.|:.|:      |:|. ||.   
Mouse   113 LPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYRRV------ETPVLPPVLVP 171

  Fly   339 -------QRSKMLRLKDADFEED-------SQNDAKSAAL------------------------- 364
                   |.|.:.:.:.|....:       :..|:...:|                         
Mouse   172 RHSEYNPQLSLLAKFRSASLHSEPLMPHNATYPDSFQQSLCPAPPSSPGHVFPQSPCPTSYPHSP 236

  Fly   365 -STWSAESTSISNIYKPALYESVTTDGKDHNINSQVWCQIAYWEMAHRVGEFFHAKTNAVNI--Y 426
             |...::|....:.::|..||           ..|.||.:||:|:.:||||.|.|.:.:|.|  :
Mouse   237 GSPSESDSPYQHSDFRPVCYE-----------EPQHWCSVAYYELNNRVGETFQASSRSVLIDGF 290

  Fly   427 TDGIVASEVDSMCLRDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVWIYNRGNTTIFVDSPTL 491
            ||  .::..:..||..|:....  :|.:...|..:|.||.|....|:|:.....:::|||.    
Mouse   291 TD--PSNNRNRFCLGLLSNVNR--NSTIENTRRHIGKGVHLYYVGGEVYAECVSDSSIFVQ---- 347

  Fly   492 SENLD--------RVCKVMPGYCLKAFETNR-AELLSMRDHGHHPMGPV----DYFSIKISFGKG 543
            |.|.:        .|||:..|..||.|.... |:||:  ...||....|    ...:|::||.||
Mouse   348 SRNCNYQHGFHPATVCKIPSGCSLKVFNNQLFAQLLA--QSVHHGFEVVYELTKMCTIRMSFVKG 410

  Fly   544 WGRDYKRQDIMGCPCWLEVHFSHLRXQYL--MLARSAGPHS 582
            ||.:|.|||:...|||:|:|. |...|:|  :|.:...||:
Mouse   411 WGAEYHRQDVTSTPCWIEIHL-HGPLQWLDKVLTQMGSPHN 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 28/115 (24%)
MH2_I-SMAD 400..565 CDD:199821 60/179 (34%)
Smad9XP_036019060.1 MH1_SMAD_1_5_9 41..162 CDD:199814 28/119 (24%)
MH2 256..456 CDD:412135 69/217 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.