DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dad and SMAD3

DIOPT Version :9

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_005893.1 Gene:SMAD3 / 4088 HGNCID:6769 Length:425 Species:Homo sapiens


Alignment Length:392 Identity:108/392 - (27%)
Similarity:164/392 - (41%) Gaps:89/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 AVKSRLDPPTKT-QRDVVEPTTTTAPTYLQCILIPCKTQTVWE-------PHVTASRLFFWRELW 295
            ||||.:....|| |.|.:|...||.....:||.||.......:       |||...||:.|.:|.
Human    34 AVKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLH 98

  Fly   296 NAKELKRLPTCPAA----RDCIYMCCNPLHWFRILHQPETESPT-PPYQRSKMLRLKDADFEEDS 355
            :..||:.:..|..|    :|  .:|.||.|:.|:      |:|. ||..           ....:
Human    99 SHHELRAMELCEFAFNMKKD--EVCVNPYHYQRV------ETPVLPPVL-----------VPRHT 144

  Fly   356 QNDAKSAALSTWS---AESTSI-------SNIYK--PALYESVTTDGKDHNINSQV--------- 399
            :..|:...|..:|   .|:|:.       |||.:  |..|.|...:..||.:|..:         
Human   145 EIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSP 209

  Fly   400 ----------------------WCQIAYWEMAHRVGEFFHAKTNAVNI--YTDGIVASEVDSMCL 440
                                  ||.|:|:|:..||||.|||...::.:  :||   .|..:..||
Human   210 NPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTD---PSNSERFCL 271

  Fly   441 RDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVWIYNRGNTTIFVDSPTLSENLD----RVCKV 501
            ..|:....  ::.|...|..:|.||.|....|:|:.....::.|||.||..::...    .|||:
Human   272 GLLSNVNR--NAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKI 334

  Fly   502 MPGYCLKAFETNR-AELLSMR-DHGHHPMGPVDYF-SIKISFGKGWGRDYKRQDIMGCPCWLEVH 563
            .||..||.|.... |.||:.. :.|...:..:... :|::||.||||.:|:||.:...|||:|:|
Human   335 PPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELH 399

  Fly   564 FS 565
            .:
Human   400 LN 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 32/101 (32%)
MH2_I-SMAD 400..565 CDD:199821 58/173 (34%)
SMAD3NP_005893.1 MH1_SMAD_2_3 8..132 CDD:199815 32/105 (30%)
Linker 137..231 15/104 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..208 9/42 (21%)
MH2_SMAD_2_3 224..414 CDD:199826 58/183 (32%)
Sufficient for interaction with XPO4. /evidence=ECO:0000269|PubMed:16449645 271..324 15/54 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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