DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dad and smad7

DIOPT Version :9

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_778257.2 Gene:smad7 / 326282 ZFINID:ZDB-GENE-030128-3 Length:372 Species:Danio rerio


Alignment Length:434 Identity:127/434 - (29%)
Similarity:186/434 - (42%) Gaps:95/434 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 QDRSPDQGQVQPVDRRMISATTFTTMFRKCCGGATESTSGSTLTIPVSTSRATAHPPQTQAQNGK 215
            :.|:|.:|:                      |.|...|.|.|    .....|:...|.|:|:   
Zfish    15 RSRAPVEGE----------------------GDADTGTRGGT----AGCCLASKPNPGTEAE--- 50

  Fly   216 RFREDFEALMKQLKRKQRNELLLAVKSRLDPPTKTQRDVVEPTTTTAPTYLQCILIPCKTQTVWE 280
             .:....:::|::|.||...||.||:||              ....:|    |:|:|.|......
Zfish    51 -LKALTYSILKKIKEKQLEVLLQAVESR--------------GGARSP----CLLLPGKADARLG 96

  Fly   281 PH-----VTASRLFFWRELWNAKELKRLPTCPAARDCIY-------MCCNPLHWFRILHQPETES 333
            .|     :...::|.|.:|.::.|||||..|.:     |       :||||.|..|:.   |.||
Zfish    97 QHSYPLPLLLYKVFRWPDLRHSSELKRLSCCES-----YGKINPELVCCNPHHMSRLC---ELES 153

  Fly   334 PTPPYQR--SKMLRLKDADFEEDSQNDAKSAALSTWSAESTSISNIYKPALYESVTTDGKDHNIN 396
            |.|||.|  :..|:..|:.....:..:....|.|.....|.|:      ||.|.    |:..:  
Zfish   154 PPPPYSRYPTDFLKPPDSPGSVPASTETGGTAYSAPMGFSDSL------ALQER----GEQPH-- 206

  Fly   397 SQVWCQIAYWEMAHRVGEFFHAKTNAVNIYTDGIVASEVDSMCLRDLTPAGNQIHSVVPKARHTV 461
               ||.:||||...|||..:..:..:::|:.|   ..:....||..|  |......:|...|..:
Zfish   207 ---WCVVAYWEEKTRVGRLYSVQEPSLDIFYD---LPQGTGFCLGQL--ASENKSQLVQMVRAKI 263

  Fly   462 GLGVTLSLENGDVWIYNRGNTTIFVDSPTLSENLDR----VCKVMPGYCLKAFETNRAELLSMRD 522
            |.|:.||.|...||:|||....||:.|.|| :|.|.    |.||.||:.:|||:..:|..|...:
Zfish   264 GYGIQLSREADGVWVYNRSCYPIFIKSATL-DNPDSRTLLVHKVFPGFSIKAFDFEKAGSLQRPN 327

  Fly   523 HGHHPMGPVDYFSIKISFGKGWGRDYKRQDIMGCPCWLEVHFSH 566
            .......|...|:::|||.||||:.|.||.|..|||||||.|::
Zfish   328 DHEFSQQPRTGFTVQISFVKGWGQCYTRQFISSCPCWLEVIFNN 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 36/143 (25%)
MH2_I-SMAD 400..565 CDD:199821 64/168 (38%)
smad7NP_778257.2 MH1_SMAD_7 36..152 CDD:199818 37/145 (26%)
MH2_SMAD_7 200..370 CDD:199825 66/184 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576819
Domainoid 1 1.000 123 1.000 Domainoid score I5527
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D193735at33208
OrthoFinder 1 1.000 - - FOG0003707
OrthoInspector 1 1.000 - - otm26019
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13703
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5077
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.840

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