DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dad and Smad3

DIOPT Version :10

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_037227.1 Gene:Smad3 / 25631 RGDID:3032 Length:425 Species:Rattus norvegicus


Alignment Length:392 Identity:108/392 - (27%)
Similarity:164/392 - (41%) Gaps:89/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   239 AVKSRLDPPTKT-QRDVVEPTTTTAPTYLQCILIPCKTQTVWE-------PHVTASRLFFWRELW 295
            ||||.:....|| |.|.:|...||.....:||.||.......:       |||...||:.|.:|.
  Rat    34 AVKSLVKKLKKTGQLDELEKAITTQNVNTKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLH 98

  Fly   296 NAKELKRLPTCPAA----RDCIYMCCNPLHWFRILHQPETESPT-PPYQRSKMLRLKDADFEEDS 355
            :..||:.:..|..|    :|  .:|.||.|:.|:      |:|. ||..           ....:
  Rat    99 SHHELRAMELCEFAFNMKKD--EVCVNPYHYQRV------ETPVLPPVL-----------VPRHT 144

  Fly   356 QNDAKSAALSTWS---AESTSI-------SNIYK--PALYESVTTDGKDHNINSQV--------- 399
            :..|:...|..:|   .|:|:.       |||.:  |..|.|...:..||.:|..:         
  Rat   145 EIPAEFPPLDDYSHSIPENTNFPAGIEPQSNIPETPPPGYLSEDGETSDHQMNHSMDAGSPNLSP 209

  Fly   400 ----------------------WCQIAYWEMAHRVGEFFHAKTNAVNI--YTDGIVASEVDSMCL 440
                                  ||.|:|:|:..||||.|||...::.:  :||   .|..:..||
  Rat   210 NPMSPAHNNLDLQPVTYCEPAFWCSISYYELNQRVGETFHASQPSMTVDGFTD---PSNSERFCL 271

  Fly   441 RDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVWIYNRGNTTIFVDSPTLSENLD----RVCKV 501
            ..|:....  ::.|...|..:|.||.|....|:|:.....::.|||.||..::...    .|||:
  Rat   272 GLLSNVNR--NAAVELTRRHIGRGVRLYYIGGEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKI 334

  Fly   502 MPGYCLKAFETNR-AELLSMR-DHGHHPMGPVDYF-SIKISFGKGWGRDYKRQDIMGCPCWLEVH 563
            .||..||.|.... |.||:.. :.|...:..:... :|::||.||||.:|:||.:...|||:|:|
  Rat   335 PPGCNLKIFNNQEFAALLAQSVNQGFEAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELH 399

  Fly   564 FS 565
            .:
  Rat   400 LN 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 32/101 (32%)
MH2_I-SMAD 400..565 CDD:199821 58/173 (34%)
Smad3NP_037227.1 MH1_SMAD_2_3 8..132 CDD:199815 32/105 (30%)
Linker 137..231 15/104 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..208 9/42 (21%)
MH2_SMAD_2_3 224..414 CDD:199826 58/183 (32%)
Sufficient for interaction with XPO4. /evidence=ECO:0000250 271..324 15/54 (28%)

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