DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dad and sma-2

DIOPT Version :9

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001370321.1 Gene:sma-2 / 176229 WormBaseID:WBGene00004856 Length:418 Species:Caenorhabditis elegans


Alignment Length:409 Identity:94/409 - (22%)
Similarity:153/409 - (37%) Gaps:106/409 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 REDFEALMKQLKRKQRNEL-LLAVKSRLDPPTKTQRDVVEPTTTTAPTYLQCILIPCKTQTVWE- 280
            ::..:.|||:|.:..:..| .|....|.....||                :|:.||.......: 
 Worm    27 KKAIDNLMKKLIKHNKQALENLEFALRCQGQQKT----------------ECVTIPRSLDGRLQI 75

  Fly   281 ------PHVTASRLFFWRELWNAKELKRLPTCPAARDCIY-----MCCNPLHWFRILHQPETESP 334
                  |||...|::.|.:|.:..|||.:..|   |.|..     :|.||.|:.|: |......|
 Worm    76 SHRKALPHVIYCRVYRWPDLQSHHELKAIEDC---RFCYESGQKDICINPYHYKRV-HATGVLPP 136

  Fly   335 T--------PPYQRSKMLRLKDADFEEDSQNDAKSAALSTWSAESTSISNI---------YKPAL 382
            .        ||.:....|    |.|:....:.::       ..::.:::|:         |.|..
 Worm   137 VLVPRYSEKPPQEVPPTL----AKFQLMEMSGSR-------MPQNVNMANVNFTANQFHQYNPNG 190

  Fly   383 YESVTTDGK--------------DHNINSQVWCQIAYWEMAHRVGEFFHAKTNAVNIYTDGIVAS 433
            .|.:.|..|              |.....|.|..::|:|:..||||  ..|.::..|..||..  
 Worm   191 IEEMDTSQKFDIPPGVPTCLVPFDKVWEEQFWATVSYYELNTRVGE--QVKVSSTTITIDGFT-- 251

  Fly   434 EVDSMCLRDLTPAGNQI----------HSVVPKARHTVGLGVTLSL--ENGDVWIYNRGNTTIFV 486
               ..|:.     |::|          ::.:...|..:|.||.|:.  .||.::.....::.|||
 Worm   252 ---DPCIN-----GSKISLGLFSNVNRNATIENTRRHIGNGVKLTYVRSNGSLFAQCESDSAIFV 308

  Fly   487 DSPTLSE----NLDRVCKVMPGYCLKAF--ETNRAELLSMRDHGHHPMGPVDYFS-IKISFGKGW 544
            .|...:.    :...|.|:.....||.|  |..|..|......|......:...: |::||.|||
 Worm   309 QSSNCNYINGFHSTTVVKIANKCSLKIFDMEIFRQLLEDCSRRGFDASFDLQKMTFIRMSFVKGW 373

  Fly   545 GRDYKRQDIMGCPCWLEVH 563
            |.:|:|||:...|||:|:|
 Worm   374 GAEYQRQDVTSTPCWIEIH 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 30/123 (24%)
MH2_I-SMAD 400..565 CDD:199821 50/183 (27%)
sma-2NP_001370321.1 MH1 5..130 CDD:412134 29/122 (24%)
MH2_R-SMAD 222..405 CDD:199820 50/183 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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