DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dad and Smad4

DIOPT Version :9

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_032566.2 Gene:Smad4 / 17128 MGIID:894293 Length:551 Species:Mus musculus


Alignment Length:572 Identity:124/572 - (21%)
Similarity:184/572 - (32%) Gaps:229/572 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 TESTSGSTLTIPVSTSRATAHPPQTQAQNGKRFREDF-----EALMKQLKRKQRNELLLAVKSRL 244
            |.:::.:.|:|        .|......|.|:  .|.|     |:|:|:||.|         |..|
Mouse     9 TPTSNDACLSI--------VHSLMCHRQGGE--SETFAKRAIESLVKKLKEK---------KDEL 54

  Fly   245 DPPTKTQRDVVEPTTTTAPTYLQCILI----PCKTQTVWE---PHVTASRLFFWRELWNAKELKR 302
            |       .::...||......:|:.|    ..:.|....   |||..:||:.|.:| :..|||.
Mouse    55 D-------SLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWPDL-HKNELKH 111

  Fly   303 LPTCPAARD--CIYMCCNPLHWFRIL--------------------------------------- 326
            :..|..|.|  |..:|.||.|:.|::                                       
Mouse   112 VKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSMLVKDEYVHDFEGQPSLPTEGH 176

  Fly   327 ------HQPETESPTPPYQRSKMLRLKDADFEEDSQNDAKSAALSTWSAESTSISNIYKPAL--- 382
                  |.|...:.|..|....:|.            .|:|.|.||.:..:..:::..:||.   
Mouse   177 SIQTIQHPPSNRASTETYSAPALLA------------PAESNATSTTNFPNIPVASTSQPASILA 229

  Fly   383 -------------------------------YESVT----------TDGKDHNINS--------- 397
                                           :.|.|          |....|:.|.         
Mouse   230 GSHSEGLLQIASGPQPGQQQNGFTAQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMP 294

  Fly   398 -------------------------QVWCQIAYWEMAHRVGEFFHAKTNAVNIYTDGIV-ASEVD 436
                                     :.||.|||:||..:|||.|...::...:..||.| .|..|
Mouse   295 PHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQVGETFKVPSSCPVVTVDGYVDPSGGD 359

  Fly   437 SMCLRDLTPAGNQIH--SVVPKARHTVGLGVTLSLE-NGDVWIYNRGNTTIFVDSPTLSENL--- 495
            ..||..|    :.:|  ..:.:||..:|.||.|..: .||||:....:..:||.|..|....   
Mouse   360 RFCLGQL----SNVHRTEAIERARLHIGKGVQLECKGEGDVWVRCLSDHAVFVQSYYLDREAGRA 420

  Fly   496 --DRVCKVMPGYCLKAFETNR---------------AELLSMRDHGHHPMGP------------- 530
              |.|.|:.|...:|.|:..:               |...:....|:.| ||             
Mouse   421 PGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIP-GPGSVGGIAPAISLS 484

  Fly   531 ------VDYFS----IKISFGKGWGRDYKRQDIMGCPCWLEVHFSHLRXQYL 572
                  ||...    :::||.||||.||.||.|...|||:|:|. |...|.|
Mouse   485 AAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHL-HRALQLL 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 39/190 (21%)
MH2_I-SMAD 400..565 CDD:199821 63/211 (30%)
Smad4NP_032566.2 Mediates interaction with ZBTB7A. /evidence=ECO:0000250|UniProtKB:Q13485 1..321 58/350 (17%)
MH1_SMAD_4 14..138 CDD:199816 40/150 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..192 2/25 (8%)
SAD 274..319 3/44 (7%)
MH2_SMAD_4 319..540 CDD:199823 66/223 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834114
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3701
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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