DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dad and smad6a

DIOPT Version :10

Sequence 1:NP_001369021.1 Gene:Dad / 42059 FlyBaseID:FBgn0020493 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001019981.2 Gene:smad6a / 116992 ZFINID:ZDB-GENE-011015-1 Length:456 Species:Danio rerio


Alignment Length:421 Identity:126/421 - (29%)
Similarity:188/421 - (44%) Gaps:71/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 GGATESTSGSTLT------IPVSTSR---------------ATAHPPQTQAQNGKRFREDFEALM 225
            |...:.:.|.|:|      :|.|.:|               .:....:|.|...:..::...|.:
Zfish    73 GPLNDGSEGRTVTCCLFKDLPRSKNRLACRVEHRNHNNYSSLSGRERKTGAVTEQELKKCTYAFL 137

  Fly   226 KQLKRKQRNELLLAVKSRLDPPT----KTQRDVVEPTTTTAPTYLQCILIPCKTQTVWEPHVTAS 286
            |:||.|..:.||.||:|:...|:    .:|.:|.......:|.||.|                  
Zfish   138 KKLKDKSLDVLLEAVESQGGMPSGCVLVSQTEVRIGGHLVSPQYLLC------------------ 184

  Fly   287 RLFFWRELWNAKELKRLPTCPA--ARDCIYMCCNPLHWFRILHQPETESPTPPYQRSKMLRLKDA 349
            |||.|.:|..:..||.|..|.:  |.|...:||||.|:.|:....:.::|.|||.....|     
Zfish   185 RLFRWPDLRLSSLLKPLCHCQSFRAEDSQTLCCNPHHYSRLCGPVKDDTPPPPYSHLSPL----- 244

  Fly   350 DFEEDSQNDAKSAALSTWSAEST----SISNIYKPALYESVTTDGKDHNINSQVWCQIAYWEMAH 410
              .|....::....|.....|:|    .:|..|..|.. |.::..::|      ||.:||||:..
Zfish   245 --PEHKPLNSSLPMLPYIETEATRSAGGLSQDYSDASM-SPSSLAQNH------WCNVAYWELRT 300

  Fly   411 RVGEFFHAKTNAVNIYTDGIVASEVDSMCLRDLTPAGNQIHSVVPKARHTVGLGVTLSLENGDVW 475
            |||..:.....:::|:.|   ..:...:|| .|.|...:..| |.:.|..:|.|:.||.|...||
Zfish   301 RVGRLYPVHDASLSIFYD---LPQGTGLCL-GLLPLSPRSTS-VQRTRGKIGHGILLSKEPDGVW 360

  Fly   476 IYNRGNTTIFVDSPTLSEN--LD-RVCKVMPGYCLKAFETNRAELLSMRDHGHHPMGPVDYFSIK 537
            .|||....|||:||||..:  |. .|.:|||||.:|.|:..::..:....|..||.||.|..|::
Zfish   361 AYNRSQHPIFVNSPTLEHHPYLSLTVRRVMPGYSIKVFDYEKSCQMQPASHPVHPEGPYDPNSVR 425

  Fly   538 ISFGKGWGRDYKRQDIMGCPCWLEVHFSHLR 568
            |||.||||..|.||.|..||||||:..::.|
Zfish   426 ISFAKGWGPCYSRQFITSCPCWLEILLNNHR 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DadNP_001369021.1 MH1_SMAD_6_7 197..329 CDD:199813 38/152 (25%)
MH2_I-SMAD 400..565 CDD:199821 68/167 (41%)
smad6aNP_001019981.2 MH1_SMAD_6 118..229 CDD:199817 36/128 (28%)
MH2 281..454 CDD:469593 70/183 (38%)

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